Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Slc6a1P31648 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Slc6a1P31648 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Slc6a1P31648 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Slc6a1P31648 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Slc6a1P31648 Gm5763-201ENSMUST00000155951 1530 ntBASIC11.86□□□□□ -0.51
Slc6a1P31648 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Slc6a1P31648 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Slc6a1P31648 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Slc6a1P31648 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Slc6a1P31648 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Slc6a1P31648 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Slc6a1P31648 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a1P31648 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a1P31648 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Slc6a1P31648 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a1P31648 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a1P31648 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a1P31648 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a1P31648 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a1P31648 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a1P31648 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.85□□□□□ -0.51
Slc6a1P31648 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a1P31648 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Slc6a1P31648 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Slc6a1P31648 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a1P31648 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.85□□□□□ -0.51
Slc6a1P31648 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a1P31648 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a1P31648 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a1P31648 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a1P31648 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC11.85□□□□□ -0.51
Slc6a1P31648 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC11.85□□□□□ -0.51
Slc6a1P31648 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a1P31648 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC11.85□□□□□ -0.51
Slc6a1P31648 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC11.85□□□□□ -0.51
Slc6a1P31648 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC11.85□□□□□ -0.51
Slc6a1P31648 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Slc6a1P31648 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC11.85□□□□□ -0.51
Slc6a1P31648 AC131690.1-201ENSMUST00000218406 374 ntBASIC11.85□□□□□ -0.51
Slc6a1P31648 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a1P31648 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a1P31648 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a1P31648 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a1P31648 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a1P31648 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Slc6a1P31648 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Slc6a1P31648 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Slc6a1P31648 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a1P31648 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a1P31648 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a1P31648 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a1P31648 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Slc6a1P31648 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a1P31648 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a1P31648 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a1P31648 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a1P31648 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Slc6a1P31648 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a1P31648 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a1P31648 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a1P31648 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a1P31648 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Slc6a1P31648 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a1P31648 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a1P31648 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a1P31648 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a1P31648 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a1P31648 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a1P31648 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a1P31648 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a1P31648 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a1P31648 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Slc6a1P31648 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.84□□□□□ -0.51
Slc6a1P31648 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a1P31648 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a1P31648 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC11.84□□□□□ -0.51
Slc6a1P31648 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.84□□□□□ -0.51
Slc6a1P31648 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a1P31648 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Slc6a1P31648 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.84□□□□□ -0.51
Slc6a1P31648 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC11.84□□□□□ -0.51
Slc6a1P31648 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a1P31648 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a1P31648 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Slc6a1P31648 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a1P31648 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Slc6a1P31648 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a1P31648 Gm27702-201ENSMUST00000184512 56 ntBASIC11.84□□□□□ -0.51
Slc6a1P31648 Mir7036b-201ENSMUST00000184791 63 ntBASIC11.84□□□□□ -0.51
Slc6a1P31648 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.84□□□□□ -0.51
Slc6a1P31648 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a1P31648 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a1P31648 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a1P31648 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a1P31648 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Slc6a1P31648 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a1P31648 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a1P31648 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a1P31648 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms