Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Gm15957-201ENSMUST00000118893 974 ntBASIC12.74□□□□□ -0.37
Cd40lgP27548 Gm12151-201ENSMUST00000121374 290 ntBASIC12.74□□□□□ -0.37
Cd40lgP27548 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cd40lgP27548 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cd40lgP27548 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.74□□□□□ -0.37
Cd40lgP27548 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.74□□□□□ -0.37
Cd40lgP27548 Gm9063-201ENSMUST00000223299 582 ntBASIC12.74□□□□□ -0.37
Cd40lgP27548 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cd40lgP27548 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cd40lgP27548 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cd40lgP27548 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.74□□□□□ -0.37
Cd40lgP27548 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cd40lgP27548 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cd40lgP27548 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cd40lgP27548 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cd40lgP27548 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Cd40lgP27548 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Cd40lgP27548 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cd40lgP27548 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cd40lgP27548 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cd40lgP27548 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cd40lgP27548 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cd40lgP27548 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cd40lgP27548 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cd40lgP27548 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cd40lgP27548 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cd40lgP27548 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Cd40lgP27548 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cd40lgP27548 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Cd40lgP27548 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Cd40lgP27548 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cd40lgP27548 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cd40lgP27548 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cd40lgP27548 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cd40lgP27548 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cd40lgP27548 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.73□□□□□ -0.37
Cd40lgP27548 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.73□□□□□ -0.37
Cd40lgP27548 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cd40lgP27548 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cd40lgP27548 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cd40lgP27548 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.73□□□□□ -0.37
Cd40lgP27548 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.73□□□□□ -0.37
Cd40lgP27548 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.73□□□□□ -0.37
Cd40lgP27548 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.73□□□□□ -0.37
Cd40lgP27548 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cd40lgP27548 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Cd40lgP27548 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cd40lgP27548 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Cd40lgP27548 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cd40lgP27548 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Cd40lgP27548 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cd40lgP27548 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cd40lgP27548 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cd40lgP27548 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd40lgP27548 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd40lgP27548 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd40lgP27548 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd40lgP27548 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Cd40lgP27548 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd40lgP27548 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd40lgP27548 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd40lgP27548 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd40lgP27548 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd40lgP27548 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cd40lgP27548 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd40lgP27548 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd40lgP27548 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd40lgP27548 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd40lgP27548 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd40lgP27548 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cd40lgP27548 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd40lgP27548 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd40lgP27548 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd40lgP27548 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd40lgP27548 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd40lgP27548 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.72□□□□□ -0.37
Cd40lgP27548 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Cd40lgP27548 Gm15393-201ENSMUST00000120499 219 ntBASIC12.72□□□□□ -0.37
Cd40lgP27548 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cd40lgP27548 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd40lgP27548 Gm6916-202ENSMUST00000205523 195 ntBASIC12.72□□□□□ -0.37
Cd40lgP27548 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.72□□□□□ -0.37
Cd40lgP27548 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd40lgP27548 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd40lgP27548 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd40lgP27548 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd40lgP27548 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Cd40lgP27548 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd40lgP27548 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cd40lgP27548 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd40lgP27548 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd40lgP27548 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd40lgP27548 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd40lgP27548 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Cd40lgP27548 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd40lgP27548 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Cd40lgP27548 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd40lgP27548 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cd40lgP27548 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd40lgP27548 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms