Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vti1aO89116 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vti1aO89116 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.85□□□□□ -0.03
Vti1aO89116 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.85□□□□□ -0.03
Vti1aO89116 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vti1aO89116 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vti1aO89116 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vti1aO89116 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Vti1aO89116 Gm11425-201ENSMUST00000119608 498 ntBASIC14.85□□□□□ -0.03
Vti1aO89116 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vti1aO89116 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vti1aO89116 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC14.85□□□□□ -0.03
Vti1aO89116 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vti1aO89116 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC14.85□□□□□ -0.03
Vti1aO89116 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vti1aO89116 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.85□□□□□ -0.03
Vti1aO89116 Gm5425-201ENSMUST00000214125 459 ntBASIC14.85□□□□□ -0.03
Vti1aO89116 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.85□□□□□ -0.03
Vti1aO89116 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vti1aO89116 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vti1aO89116 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Vti1aO89116 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.85□□□□□ -0.03
Vti1aO89116 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vti1aO89116 Gm9396-201ENSMUST00000076703 567 ntBASIC14.85□□□□□ -0.03
Vti1aO89116 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Vti1aO89116 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vti1aO89116 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Vti1aO89116 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vti1aO89116 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vti1aO89116 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.85□□□□□ -0.03
Vti1aO89116 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vti1aO89116 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vti1aO89116 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vti1aO89116 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vti1aO89116 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Vti1aO89116 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vti1aO89116 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vti1aO89116 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vti1aO89116 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vti1aO89116 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vti1aO89116 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vti1aO89116 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vti1aO89116 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vti1aO89116 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vti1aO89116 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vti1aO89116 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vti1aO89116 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vti1aO89116 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vti1aO89116 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vti1aO89116 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vti1aO89116 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vti1aO89116 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Vti1aO89116 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Vti1aO89116 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Vti1aO89116 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vti1aO89116 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vti1aO89116 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vti1aO89116 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.84□□□□□ -0.03
Vti1aO89116 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.84□□□□□ -0.03
Vti1aO89116 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.84□□□□□ -0.03
Vti1aO89116 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vti1aO89116 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vti1aO89116 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Vti1aO89116 Gm8584-201ENSMUST00000171982 758 ntBASIC14.84□□□□□ -0.03
Vti1aO89116 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.84□□□□□ -0.03
Vti1aO89116 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.84□□□□□ -0.03
Vti1aO89116 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vti1aO89116 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vti1aO89116 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vti1aO89116 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Vti1aO89116 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vti1aO89116 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vti1aO89116 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Vti1aO89116 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vti1aO89116 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vti1aO89116 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Vti1aO89116 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vti1aO89116 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vti1aO89116 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vti1aO89116 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vti1aO89116 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Vti1aO89116 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.83□□□□□ -0.03
Vti1aO89116 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Vti1aO89116 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.03
Vti1aO89116 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Vti1aO89116 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Vti1aO89116 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Vti1aO89116 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Vti1aO89116 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vti1aO89116 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vti1aO89116 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Vti1aO89116 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vti1aO89116 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vti1aO89116 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Vti1aO89116 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vti1aO89116 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Vti1aO89116 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.83□□□□□ -0.04
Vti1aO89116 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Vti1aO89116 Mir7654-201ENSMUST00000185082 70 ntBASIC14.83□□□□□ -0.04
Vti1aO89116 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms