Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.21□□□□□ -0.13
CopeO89079 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CopeO89079 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CopeO89079 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.21□□□□□ -0.13
CopeO89079 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CopeO89079 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
CopeO89079 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CopeO89079 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CopeO89079 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CopeO89079 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CopeO89079 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CopeO89079 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.21□□□□□ -0.13
CopeO89079 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.21□□□□□ -0.13
CopeO89079 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CopeO89079 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CopeO89079 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CopeO89079 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CopeO89079 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
CopeO89079 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CopeO89079 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
CopeO89079 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CopeO89079 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CopeO89079 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CopeO89079 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.21□□□□□ -0.14
CopeO89079 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CopeO89079 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CopeO89079 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CopeO89079 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CopeO89079 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CopeO89079 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CopeO89079 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CopeO89079 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CopeO89079 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.2□□□□□ -0.14
CopeO89079 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CopeO89079 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CopeO89079 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.2□□□□□ -0.14
CopeO89079 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CopeO89079 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CopeO89079 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CopeO89079 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CopeO89079 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
CopeO89079 Gm1401-201ENSMUST00000122048 772 ntBASIC14.2□□□□□ -0.14
CopeO89079 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.2□□□□□ -0.14
CopeO89079 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.2□□□□□ -0.14
CopeO89079 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CopeO89079 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CopeO89079 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CopeO89079 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CopeO89079 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
CopeO89079 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CopeO89079 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CopeO89079 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CopeO89079 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CopeO89079 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CopeO89079 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CopeO89079 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CopeO89079 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CopeO89079 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CopeO89079 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CopeO89079 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CopeO89079 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CopeO89079 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CopeO89079 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CopeO89079 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.19□□□□□ -0.14
CopeO89079 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
CopeO89079 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CopeO89079 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CopeO89079 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CopeO89079 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CopeO89079 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CopeO89079 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CopeO89079 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CopeO89079 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CopeO89079 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.19□□□□□ -0.14
CopeO89079 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.19□□□□□ -0.14
CopeO89079 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.19□□□□□ -0.14
CopeO89079 Gm12260-201ENSMUST00000122447 411 ntBASIC14.19□□□□□ -0.14
CopeO89079 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CopeO89079 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CopeO89079 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.19□□□□□ -0.14
CopeO89079 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.19□□□□□ -0.14
CopeO89079 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.19□□□□□ -0.14
CopeO89079 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.19□□□□□ -0.14
CopeO89079 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.19□□□□□ -0.14
CopeO89079 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.19□□□□□ -0.14
CopeO89079 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CopeO89079 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.19□□□□□ -0.14
CopeO89079 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.19□□□□□ -0.14
CopeO89079 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CopeO89079 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CopeO89079 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CopeO89079 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CopeO89079 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CopeO89079 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CopeO89079 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CopeO89079 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CopeO89079 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CopeO89079 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CopeO89079 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CopeO89079 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms