Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mmp8O70138 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mmp8O70138 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mmp8O70138 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mmp8O70138 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mmp8O70138 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mmp8O70138 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mmp8O70138 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Mmp8O70138 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC16.77■□□□□ 0.28
Mmp8O70138 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Mmp8O70138 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Mmp8O70138 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mmp8O70138 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mmp8O70138 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Mmp8O70138 AC155258.1-201ENSMUST00000219303 253 ntBASIC16.77■□□□□ 0.28
Mmp8O70138 Gm18624-201ENSMUST00000220966 658 ntBASIC16.77■□□□□ 0.28
Mmp8O70138 AC238811.3-201ENSMUST00000225422 709 ntBASIC16.77■□□□□ 0.28
Mmp8O70138 Gm5161-201ENSMUST00000075243 853 ntBASIC16.77■□□□□ 0.28
Mmp8O70138 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Mmp8O70138 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Mmp8O70138 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Mmp8O70138 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.77■□□□□ 0.27
Mmp8O70138 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
Mmp8O70138 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Mmp8O70138 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Mmp8O70138 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Mmp8O70138 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Mmp8O70138 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Mmp8O70138 Gm13127-201ENSMUST00000118978 1389 ntBASIC16.77■□□□□ 0.27
Mmp8O70138 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Mmp8O70138 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mmp8O70138 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mmp8O70138 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Mmp8O70138 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Mmp8O70138 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mmp8O70138 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Mmp8O70138 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mmp8O70138 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Mmp8O70138 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Mmp8O70138 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mmp8O70138 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Mmp8O70138 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mmp8O70138 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC16.76■□□□□ 0.27
Mmp8O70138 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC16.76■□□□□ 0.27
Mmp8O70138 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC16.76■□□□□ 0.27
Mmp8O70138 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC16.76■□□□□ 0.27
Mmp8O70138 Gm7558-201ENSMUST00000193221 1165 ntBASIC16.76■□□□□ 0.27
Mmp8O70138 Gm37917-201ENSMUST00000194711 392 ntBASIC16.76■□□□□ 0.27
Mmp8O70138 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC16.76■□□□□ 0.27
Mmp8O70138 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC16.76■□□□□ 0.27
Mmp8O70138 Gm17330-201ENSMUST00000221047 165 ntBASIC16.76■□□□□ 0.27
Mmp8O70138 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Mmp8O70138 Gm3695-201ENSMUST00000087222 1009 ntBASIC16.76■□□□□ 0.27
Mmp8O70138 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mmp8O70138 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mmp8O70138 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mmp8O70138 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC16.76■□□□□ 0.27
Mmp8O70138 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mmp8O70138 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mmp8O70138 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mmp8O70138 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp8O70138 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp8O70138 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp8O70138 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC16.75■□□□□ 0.27
Mmp8O70138 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC16.75■□□□□ 0.27
Mmp8O70138 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp8O70138 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp8O70138 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp8O70138 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC16.75■□□□□ 0.27
Mmp8O70138 Gm12537-201ENSMUST00000119266 1002 ntBASIC16.75■□□□□ 0.27
Mmp8O70138 Gm12070-201ENSMUST00000119551 1002 ntBASIC16.75■□□□□ 0.27
Mmp8O70138 Gm12671-201ENSMUST00000119978 1002 ntBASIC16.75■□□□□ 0.27
Mmp8O70138 Gm13292-201ENSMUST00000120014 1000 ntBASIC16.75■□□□□ 0.27
Mmp8O70138 Gm12403-201ENSMUST00000121384 959 ntBASIC16.75■□□□□ 0.27
Mmp8O70138 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp8O70138 Gm10359-201ENSMUST00000180167 1002 ntBASIC16.75■□□□□ 0.27
Mmp8O70138 Gm12033-201ENSMUST00000180654 1002 ntBASIC16.75■□□□□ 0.27
Mmp8O70138 Gm5559-201ENSMUST00000180755 1002 ntBASIC16.75■□□□□ 0.27
Mmp8O70138 Gm4335-201ENSMUST00000182581 1004 ntBASIC16.75■□□□□ 0.27
Mmp8O70138 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp8O70138 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp8O70138 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp8O70138 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp8O70138 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp8O70138 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp8O70138 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp8O70138 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp8O70138 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp8O70138 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC16.75■□□□□ 0.27
Mmp8O70138 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp8O70138 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp8O70138 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC16.75■□□□□ 0.27
Mmp8O70138 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp8O70138 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp8O70138 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
Mmp8O70138 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp8O70138 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp8O70138 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC16.74■□□□□ 0.27
Mmp8O70138 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp8O70138 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms