Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nr1i3O35627 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nr1i3O35627 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Nr1i3O35627 Gm13385-201ENSMUST00000121089 220 ntBASIC14.82□□□□□ -0.04
Nr1i3O35627 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Nr1i3O35627 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Nr1i3O35627 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nr1i3O35627 Gm5425-201ENSMUST00000214125 459 ntBASIC14.82□□□□□ -0.04
Nr1i3O35627 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.82□□□□□ -0.04
Nr1i3O35627 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nr1i3O35627 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nr1i3O35627 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nr1i3O35627 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nr1i3O35627 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nr1i3O35627 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.82□□□□□ -0.04
Nr1i3O35627 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nr1i3O35627 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nr1i3O35627 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nr1i3O35627 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nr1i3O35627 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nr1i3O35627 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Nr1i3O35627 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nr1i3O35627 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nr1i3O35627 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nr1i3O35627 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nr1i3O35627 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nr1i3O35627 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nr1i3O35627 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Nr1i3O35627 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nr1i3O35627 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nr1i3O35627 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nr1i3O35627 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nr1i3O35627 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Nr1i3O35627 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nr1i3O35627 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nr1i3O35627 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nr1i3O35627 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Nr1i3O35627 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Nr1i3O35627 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nr1i3O35627 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nr1i3O35627 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nr1i3O35627 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.81□□□□□ -0.04
Nr1i3O35627 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nr1i3O35627 Gm8410-201ENSMUST00000117225 605 ntBASIC14.81□□□□□ -0.04
Nr1i3O35627 Gm15393-201ENSMUST00000120499 219 ntBASIC14.81□□□□□ -0.04
Nr1i3O35627 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.81□□□□□ -0.04
Nr1i3O35627 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nr1i3O35627 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nr1i3O35627 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nr1i3O35627 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.81□□□□□ -0.04
Nr1i3O35627 Gm24420-201ENSMUST00000176676 59 ntBASIC14.81□□□□□ -0.04
Nr1i3O35627 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.81□□□□□ -0.04
Nr1i3O35627 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.81□□□□□ -0.04
Nr1i3O35627 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.81□□□□□ -0.04
Nr1i3O35627 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nr1i3O35627 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Nr1i3O35627 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nr1i3O35627 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nr1i3O35627 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Nr1i3O35627 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nr1i3O35627 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nr1i3O35627 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Nr1i3O35627 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nr1i3O35627 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nr1i3O35627 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nr1i3O35627 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nr1i3O35627 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nr1i3O35627 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nr1i3O35627 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nr1i3O35627 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nr1i3O35627 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nr1i3O35627 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nr1i3O35627 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Nr1i3O35627 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nr1i3O35627 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nr1i3O35627 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nr1i3O35627 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.8□□□□□ -0.04
Nr1i3O35627 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nr1i3O35627 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.8□□□□□ -0.04
Nr1i3O35627 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nr1i3O35627 Gm12585-201ENSMUST00000117307 290 ntBASIC14.8□□□□□ -0.04
Nr1i3O35627 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.8□□□□□ -0.04
Nr1i3O35627 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.8□□□□□ -0.04
Nr1i3O35627 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.8□□□□□ -0.04
Nr1i3O35627 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.8□□□□□ -0.04
Nr1i3O35627 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.8□□□□□ -0.04
Nr1i3O35627 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nr1i3O35627 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.8□□□□□ -0.04
Nr1i3O35627 Gm46209-201ENSMUST00000217912 553 ntBASIC14.8□□□□□ -0.04
Nr1i3O35627 Gm8396-201ENSMUST00000057361 823 ntBASIC14.8□□□□□ -0.04
Nr1i3O35627 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Nr1i3O35627 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Nr1i3O35627 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nr1i3O35627 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nr1i3O35627 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nr1i3O35627 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nr1i3O35627 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nr1i3O35627 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nr1i3O35627 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nr1i3O35627 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms