Protein–RNA interactions for Protein: J3QPF1

Gm10553, Predicted gene 10553, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10553J3QPF1 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Gm10553J3QPF1 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Gm10553J3QPF1 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm10553J3QPF1 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Gm10553J3QPF1 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
Gm10553J3QPF1 Gm3809-201ENSMUST00000180973 1006 ntBASIC10.54□□□□□ -0.72
Gm10553J3QPF1 Gm7063-201ENSMUST00000186840 981 ntBASIC10.54□□□□□ -0.72
Gm10553J3QPF1 Gm31326-201ENSMUST00000191856 1048 ntBASIC10.54□□□□□ -0.72
Gm10553J3QPF1 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC10.54□□□□□ -0.72
Gm10553J3QPF1 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC10.54□□□□□ -0.72
Gm10553J3QPF1 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Gm10553J3QPF1 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Gm10553J3QPF1 AC139580.1-202ENSMUST00000223574 928 ntBASIC10.54□□□□□ -0.72
Gm10553J3QPF1 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm10553J3QPF1 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm10553J3QPF1 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
Gm10553J3QPF1 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Gm10553J3QPF1 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Gm10553J3QPF1 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm10553J3QPF1 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Gm10553J3QPF1 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Gm10553J3QPF1 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm10553J3QPF1 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm10553J3QPF1 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
Gm10553J3QPF1 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Gm10553J3QPF1 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm10553J3QPF1 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm10553J3QPF1 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm10553J3QPF1 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm10553J3QPF1 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm10553J3QPF1 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Gm10553J3QPF1 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm10553J3QPF1 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm10553J3QPF1 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Gm10553J3QPF1 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC10.53□□□□□ -0.72
Gm10553J3QPF1 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Gm10553J3QPF1 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC10.53□□□□□ -0.72
Gm10553J3QPF1 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Gm10553J3QPF1 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Gm10553J3QPF1 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Gm10553J3QPF1 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm10553J3QPF1 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Gm10553J3QPF1 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Gm10553J3QPF1 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC10.53□□□□□ -0.72
Gm10553J3QPF1 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Gm10553J3QPF1 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm10553J3QPF1 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Gm10553J3QPF1 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Gm10553J3QPF1 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm10553J3QPF1 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC10.53□□□□□ -0.72
Gm10553J3QPF1 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC10.53□□□□□ -0.72
Gm10553J3QPF1 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm10553J3QPF1 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm10553J3QPF1 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm10553J3QPF1 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC10.53□□□□□ -0.72
Gm10553J3QPF1 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
Gm10553J3QPF1 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC10.53□□□□□ -0.72
Gm10553J3QPF1 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Gm10553J3QPF1 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC10.53□□□□□ -0.72
Gm10553J3QPF1 Gtpbp10-211ENSMUST00000198799 648 ntBASIC10.53□□□□□ -0.72
Gm10553J3QPF1 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC10.53□□□□□ -0.72
Gm10553J3QPF1 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC10.53□□□□□ -0.72
Gm10553J3QPF1 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm10553J3QPF1 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Gm10553J3QPF1 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC10.53□□□□□ -0.72
Gm10553J3QPF1 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Gm10553J3QPF1 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm10553J3QPF1 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Gm10553J3QPF1 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm10553J3QPF1 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Gm10553J3QPF1 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm10553J3QPF1 Gm26513-201ENSMUST00000181802 2489 ntBASIC10.53□□□□□ -0.72
Gm10553J3QPF1 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm10553J3QPF1 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm10553J3QPF1 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Gm10553J3QPF1 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC10.53□□□□□ -0.72
Gm10553J3QPF1 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm10553J3QPF1 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm10553J3QPF1 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm10553J3QPF1 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm10553J3QPF1 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm10553J3QPF1 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm10553J3QPF1 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm10553J3QPF1 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Gm10553J3QPF1 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.72
Gm10553J3QPF1 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Gm10553J3QPF1 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Gm10553J3QPF1 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Gm10553J3QPF1 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm10553J3QPF1 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm10553J3QPF1 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Gm10553J3QPF1 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC10.52□□□□□ -0.73
Gm10553J3QPF1 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Gm10553J3QPF1 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC10.52□□□□□ -0.73
Gm10553J3QPF1 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm10553J3QPF1 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm10553J3QPF1 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC10.52□□□□□ -0.73
Gm10553J3QPF1 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Gm10553J3QPF1 AL593843.1-201ENSMUST00000195891 145 ntBASIC10.52□□□□□ -0.73
Gm10553J3QPF1 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC10.52□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms