Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcf11G3X9Z4 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pcf11G3X9Z4 Gm43273-201ENSMUST00000199649 2594 ntBASIC20.52■□□□□ 0.88
Pcf11G3X9Z4 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcf11G3X9Z4 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pcf11G3X9Z4 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcf11G3X9Z4 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcf11G3X9Z4 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pcf11G3X9Z4 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pcf11G3X9Z4 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC20.51■□□□□ 0.87
Pcf11G3X9Z4 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcf11G3X9Z4 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC20.51■□□□□ 0.87
Pcf11G3X9Z4 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC20.51■□□□□ 0.87
Pcf11G3X9Z4 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcf11G3X9Z4 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcf11G3X9Z4 Gm24526-201ENSMUST00000082921 158 ntBASIC20.51■□□□□ 0.87
Pcf11G3X9Z4 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Pcf11G3X9Z4 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcf11G3X9Z4 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcf11G3X9Z4 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcf11G3X9Z4 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcf11G3X9Z4 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC20.51■□□□□ 0.87
Pcf11G3X9Z4 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcf11G3X9Z4 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcf11G3X9Z4 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
Pcf11G3X9Z4 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcf11G3X9Z4 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcf11G3X9Z4 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC20.51■□□□□ 0.87
Pcf11G3X9Z4 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC20.51■□□□□ 0.87
Pcf11G3X9Z4 Gm13342-201ENSMUST00000121055 207 ntBASIC20.51■□□□□ 0.87
Pcf11G3X9Z4 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC20.51■□□□□ 0.87
Pcf11G3X9Z4 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC20.51■□□□□ 0.87
Pcf11G3X9Z4 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC20.51■□□□□ 0.87
Pcf11G3X9Z4 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
Pcf11G3X9Z4 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcf11G3X9Z4 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcf11G3X9Z4 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcf11G3X9Z4 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcf11G3X9Z4 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Pcf11G3X9Z4 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcf11G3X9Z4 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcf11G3X9Z4 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Pcf11G3X9Z4 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcf11G3X9Z4 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcf11G3X9Z4 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcf11G3X9Z4 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcf11G3X9Z4 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Pcf11G3X9Z4 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC20.5■□□□□ 0.87
Pcf11G3X9Z4 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcf11G3X9Z4 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC20.5■□□□□ 0.87
Pcf11G3X9Z4 Gm2991-201ENSMUST00000173338 480 ntBASIC20.5■□□□□ 0.87
Pcf11G3X9Z4 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC20.5■□□□□ 0.87
Pcf11G3X9Z4 Gm6621-201ENSMUST00000193251 772 ntBASIC20.5■□□□□ 0.87
Pcf11G3X9Z4 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC20.5■□□□□ 0.87
Pcf11G3X9Z4 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC20.5■□□□□ 0.87
Pcf11G3X9Z4 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcf11G3X9Z4 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Pcf11G3X9Z4 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcf11G3X9Z4 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcf11G3X9Z4 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcf11G3X9Z4 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC20.49■□□□□ 0.87
Pcf11G3X9Z4 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcf11G3X9Z4 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Pcf11G3X9Z4 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Pcf11G3X9Z4 Gm18935-201ENSMUST00000212692 664 ntBASIC20.49■□□□□ 0.87
Pcf11G3X9Z4 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC20.49■□□□□ 0.87
Pcf11G3X9Z4 AC132384.14-201ENSMUST00000219346 1147 ntBASIC20.49■□□□□ 0.87
Pcf11G3X9Z4 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcf11G3X9Z4 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcf11G3X9Z4 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcf11G3X9Z4 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcf11G3X9Z4 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcf11G3X9Z4 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcf11G3X9Z4 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcf11G3X9Z4 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcf11G3X9Z4 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcf11G3X9Z4 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcf11G3X9Z4 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcf11G3X9Z4 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pcf11G3X9Z4 Gm22121-201ENSMUST00000175148 54 ntBASIC20.48■□□□□ 0.87
Pcf11G3X9Z4 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcf11G3X9Z4 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC20.48■□□□□ 0.87
Pcf11G3X9Z4 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pcf11G3X9Z4 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pcf11G3X9Z4 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Pcf11G3X9Z4 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pcf11G3X9Z4 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pcf11G3X9Z4 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcf11G3X9Z4 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcf11G3X9Z4 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Pcf11G3X9Z4 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pcf11G3X9Z4 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Pcf11G3X9Z4 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcf11G3X9Z4 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcf11G3X9Z4 Gm2231-201ENSMUST00000125661 612 ntBASIC20.47■□□□□ 0.87
Pcf11G3X9Z4 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC20.47■□□□□ 0.87
Pcf11G3X9Z4 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC20.47■□□□□ 0.87
Pcf11G3X9Z4 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC20.47■□□□□ 0.87
Pcf11G3X9Z4 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC20.47■□□□□ 0.87
Pcf11G3X9Z4 AC166051.1-201ENSMUST00000214313 210 ntBASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms