Protein–RNA interactions for Protein: G3X8Z7

Chrna9, Cholinergic receptor, nicotinic, alpha polypeptide 9, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna9G3X8Z7 Gm9063-201ENSMUST00000223299 582 ntBASIC14.8□□□□□ -0.04
Chrna9G3X8Z7 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chrna9G3X8Z7 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chrna9G3X8Z7 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chrna9G3X8Z7 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chrna9G3X8Z7 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chrna9G3X8Z7 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Chrna9G3X8Z7 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chrna9G3X8Z7 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chrna9G3X8Z7 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chrna9G3X8Z7 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Chrna9G3X8Z7 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chrna9G3X8Z7 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chrna9G3X8Z7 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Chrna9G3X8Z7 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chrna9G3X8Z7 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chrna9G3X8Z7 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chrna9G3X8Z7 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chrna9G3X8Z7 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chrna9G3X8Z7 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chrna9G3X8Z7 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Chrna9G3X8Z7 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chrna9G3X8Z7 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chrna9G3X8Z7 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Chrna9G3X8Z7 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chrna9G3X8Z7 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.79□□□□□ -0.04
Chrna9G3X8Z7 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.79□□□□□ -0.04
Chrna9G3X8Z7 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chrna9G3X8Z7 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chrna9G3X8Z7 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chrna9G3X8Z7 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chrna9G3X8Z7 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.79□□□□□ -0.04
Chrna9G3X8Z7 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chrna9G3X8Z7 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.79□□□□□ -0.04
Chrna9G3X8Z7 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chrna9G3X8Z7 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.79□□□□□ -0.04
Chrna9G3X8Z7 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Chrna9G3X8Z7 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chrna9G3X8Z7 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chrna9G3X8Z7 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chrna9G3X8Z7 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chrna9G3X8Z7 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chrna9G3X8Z7 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chrna9G3X8Z7 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chrna9G3X8Z7 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.79□□□□□ -0.04
Chrna9G3X8Z7 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.79□□□□□ -0.04
Chrna9G3X8Z7 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Chrna9G3X8Z7 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chrna9G3X8Z7 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chrna9G3X8Z7 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chrna9G3X8Z7 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Chrna9G3X8Z7 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chrna9G3X8Z7 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chrna9G3X8Z7 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chrna9G3X8Z7 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.78□□□□□ -0.04
Chrna9G3X8Z7 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chrna9G3X8Z7 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
Chrna9G3X8Z7 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Chrna9G3X8Z7 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chrna9G3X8Z7 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chrna9G3X8Z7 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Chrna9G3X8Z7 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.78□□□□□ -0.04
Chrna9G3X8Z7 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Chrna9G3X8Z7 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chrna9G3X8Z7 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chrna9G3X8Z7 Gm4875-201ENSMUST00000118257 786 ntBASIC14.78□□□□□ -0.04
Chrna9G3X8Z7 Gm13616-201ENSMUST00000120600 222 ntBASIC14.78□□□□□ -0.04
Chrna9G3X8Z7 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.78□□□□□ -0.04
Chrna9G3X8Z7 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chrna9G3X8Z7 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chrna9G3X8Z7 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chrna9G3X8Z7 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chrna9G3X8Z7 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chrna9G3X8Z7 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chrna9G3X8Z7 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chrna9G3X8Z7 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chrna9G3X8Z7 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chrna9G3X8Z7 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chrna9G3X8Z7 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chrna9G3X8Z7 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chrna9G3X8Z7 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Chrna9G3X8Z7 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chrna9G3X8Z7 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Chrna9G3X8Z7 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Chrna9G3X8Z7 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.77□□□□□ -0.04
Chrna9G3X8Z7 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chrna9G3X8Z7 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chrna9G3X8Z7 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chrna9G3X8Z7 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
Chrna9G3X8Z7 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.77□□□□□ -0.04
Chrna9G3X8Z7 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Chrna9G3X8Z7 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chrna9G3X8Z7 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Chrna9G3X8Z7 Gm13453-201ENSMUST00000118708 357 ntBASIC14.77□□□□□ -0.05
Chrna9G3X8Z7 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Chrna9G3X8Z7 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Chrna9G3X8Z7 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Chrna9G3X8Z7 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Chrna9G3X8Z7 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chrna9G3X8Z7 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms