Protein–RNA interactions for Protein: E9Q6B2

Ccdc85c, Coiled-coil domain-containing protein 85C, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85cE9Q6B2 Gm8385-201ENSMUST00000058999 643 ntBASIC16.84■□□□□ 0.29
Ccdc85cE9Q6B2 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc85cE9Q6B2 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.84■□□□□ 0.29
Ccdc85cE9Q6B2 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc85cE9Q6B2 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc85cE9Q6B2 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Ccdc85cE9Q6B2 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Ccdc85cE9Q6B2 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Ccdc85cE9Q6B2 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc85cE9Q6B2 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC16.84■□□□□ 0.29
Ccdc85cE9Q6B2 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.84■□□□□ 0.29
Ccdc85cE9Q6B2 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc85cE9Q6B2 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ccdc85cE9Q6B2 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Ccdc85cE9Q6B2 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ccdc85cE9Q6B2 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC16.83■□□□□ 0.28
Ccdc85cE9Q6B2 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc85cE9Q6B2 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Ccdc85cE9Q6B2 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc85cE9Q6B2 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc85cE9Q6B2 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Ccdc85cE9Q6B2 Gm8738-201ENSMUST00000172606 329 ntBASIC16.83■□□□□ 0.28
Ccdc85cE9Q6B2 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC16.83■□□□□ 0.28
Ccdc85cE9Q6B2 Gm3809-201ENSMUST00000180973 1006 ntBASIC16.83■□□□□ 0.28
Ccdc85cE9Q6B2 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Ccdc85cE9Q6B2 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc85cE9Q6B2 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc85cE9Q6B2 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc85cE9Q6B2 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Ccdc85cE9Q6B2 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc85cE9Q6B2 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc85cE9Q6B2 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Ccdc85cE9Q6B2 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc85cE9Q6B2 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc85cE9Q6B2 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc85cE9Q6B2 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc85cE9Q6B2 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc85cE9Q6B2 Gm43081-201ENSMUST00000199082 1380 ntBASIC16.82■□□□□ 0.28
Ccdc85cE9Q6B2 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc85cE9Q6B2 Gm15770-201ENSMUST00000117498 584 ntBASIC16.82■□□□□ 0.28
Ccdc85cE9Q6B2 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC16.82■□□□□ 0.28
Ccdc85cE9Q6B2 Gm26185-201ENSMUST00000157692 266 ntBASIC16.82■□□□□ 0.28
Ccdc85cE9Q6B2 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc85cE9Q6B2 Gm6407-201ENSMUST00000176468 549 ntBASIC16.82■□□□□ 0.28
Ccdc85cE9Q6B2 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc85cE9Q6B2 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc85cE9Q6B2 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc85cE9Q6B2 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Ccdc85cE9Q6B2 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc85cE9Q6B2 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc85cE9Q6B2 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc85cE9Q6B2 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc85cE9Q6B2 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.82■□□□□ 0.28
Ccdc85cE9Q6B2 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Ccdc85cE9Q6B2 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC16.82■□□□□ 0.28
Ccdc85cE9Q6B2 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc85cE9Q6B2 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc85cE9Q6B2 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc85cE9Q6B2 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc85cE9Q6B2 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc85cE9Q6B2 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc85cE9Q6B2 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc85cE9Q6B2 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc85cE9Q6B2 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.81■□□□□ 0.28
Ccdc85cE9Q6B2 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc85cE9Q6B2 Gm12208-201ENSMUST00000122004 163 ntBASIC16.81■□□□□ 0.28
Ccdc85cE9Q6B2 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc85cE9Q6B2 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc85cE9Q6B2 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC16.81■□□□□ 0.28
Ccdc85cE9Q6B2 AC173210.1-201ENSMUST00000222341 1131 ntBASIC16.81■□□□□ 0.28
Ccdc85cE9Q6B2 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc85cE9Q6B2 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc85cE9Q6B2 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc85cE9Q6B2 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc85cE9Q6B2 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC16.81■□□□□ 0.28
Ccdc85cE9Q6B2 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Ccdc85cE9Q6B2 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc85cE9Q6B2 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc85cE9Q6B2 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc85cE9Q6B2 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Ccdc85cE9Q6B2 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc85cE9Q6B2 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc85cE9Q6B2 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc85cE9Q6B2 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc85cE9Q6B2 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc85cE9Q6B2 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc85cE9Q6B2 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Ccdc85cE9Q6B2 Gm11597-201ENSMUST00000121423 964 ntBASIC16.8■□□□□ 0.28
Ccdc85cE9Q6B2 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Ccdc85cE9Q6B2 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC16.8■□□□□ 0.28
Ccdc85cE9Q6B2 Gm9211-201ENSMUST00000182882 975 ntBASIC16.8■□□□□ 0.28
Ccdc85cE9Q6B2 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ccdc85cE9Q6B2 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC16.8■□□□□ 0.28
Ccdc85cE9Q6B2 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc85cE9Q6B2 AC122876.1-201ENSMUST00000217619 825 ntBASIC16.8■□□□□ 0.28
Ccdc85cE9Q6B2 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc85cE9Q6B2 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc85cE9Q6B2 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc85cE9Q6B2 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc85cE9Q6B2 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms