Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh17E9PXF0 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Pcdh17E9PXF0 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh17E9PXF0 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.85□□□□□ -0.35
Pcdh17E9PXF0 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh17E9PXF0 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh17E9PXF0 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh17E9PXF0 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
Pcdh17E9PXF0 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.84□□□□□ -0.35
Pcdh17E9PXF0 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh17E9PXF0 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh17E9PXF0 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh17E9PXF0 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh17E9PXF0 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh17E9PXF0 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh17E9PXF0 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh17E9PXF0 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh17E9PXF0 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh17E9PXF0 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh17E9PXF0 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.84□□□□□ -0.35
Pcdh17E9PXF0 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.84□□□□□ -0.35
Pcdh17E9PXF0 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh17E9PXF0 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh17E9PXF0 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.84□□□□□ -0.35
Pcdh17E9PXF0 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.84□□□□□ -0.35
Pcdh17E9PXF0 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.84□□□□□ -0.35
Pcdh17E9PXF0 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh17E9PXF0 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Pcdh17E9PXF0 Gm18905-201ENSMUST00000205454 928 ntBASIC12.84□□□□□ -0.35
Pcdh17E9PXF0 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.84□□□□□ -0.35
Pcdh17E9PXF0 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.84□□□□□ -0.35
Pcdh17E9PXF0 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.84□□□□□ -0.35
Pcdh17E9PXF0 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.84□□□□□ -0.35
Pcdh17E9PXF0 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh17E9PXF0 Gm25857-201ENSMUST00000082788 129 ntBASIC12.84□□□□□ -0.35
Pcdh17E9PXF0 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh17E9PXF0 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh17E9PXF0 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.84□□□□□ -0.35
Pcdh17E9PXF0 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh17E9PXF0 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Pcdh17E9PXF0 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh17E9PXF0 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Pcdh17E9PXF0 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.83□□□□□ -0.35
Pcdh17E9PXF0 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh17E9PXF0 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh17E9PXF0 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh17E9PXF0 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh17E9PXF0 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.83□□□□□ -0.36
Pcdh17E9PXF0 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.83□□□□□ -0.36
Pcdh17E9PXF0 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.83□□□□□ -0.36
Pcdh17E9PXF0 Gm18307-201ENSMUST00000206864 949 ntBASIC12.83□□□□□ -0.36
Pcdh17E9PXF0 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Pcdh17E9PXF0 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh17E9PXF0 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh17E9PXF0 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Pcdh17E9PXF0 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh17E9PXF0 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh17E9PXF0 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh17E9PXF0 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh17E9PXF0 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh17E9PXF0 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh17E9PXF0 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh17E9PXF0 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh17E9PXF0 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh17E9PXF0 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.82□□□□□ -0.36
Pcdh17E9PXF0 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh17E9PXF0 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Pcdh17E9PXF0 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh17E9PXF0 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh17E9PXF0 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh17E9PXF0 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh17E9PXF0 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh17E9PXF0 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh17E9PXF0 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh17E9PXF0 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh17E9PXF0 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Pcdh17E9PXF0 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.82□□□□□ -0.36
Pcdh17E9PXF0 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh17E9PXF0 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh17E9PXF0 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.82□□□□□ -0.36
Pcdh17E9PXF0 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.82□□□□□ -0.36
Pcdh17E9PXF0 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh17E9PXF0 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Pcdh17E9PXF0 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh17E9PXF0 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Pcdh17E9PXF0 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh17E9PXF0 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Pcdh17E9PXF0 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh17E9PXF0 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh17E9PXF0 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh17E9PXF0 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Pcdh17E9PXF0 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh17E9PXF0 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh17E9PXF0 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.82□□□□□ -0.36
Pcdh17E9PXF0 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Pcdh17E9PXF0 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.82□□□□□ -0.36
Pcdh17E9PXF0 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh17E9PXF0 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Pcdh17E9PXF0 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh17E9PXF0 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms