Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hfm1D3Z4R1 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Hfm1D3Z4R1 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Hfm1D3Z4R1 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC19.01■□□□□ 0.63
Hfm1D3Z4R1 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hfm1D3Z4R1 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hfm1D3Z4R1 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hfm1D3Z4R1 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Hfm1D3Z4R1 AC139054.1-201ENSMUST00000226898 1598 ntBASIC19.01■□□□□ 0.63
Hfm1D3Z4R1 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Hfm1D3Z4R1 Gm16425-201ENSMUST00000118143 3130 ntBASIC19■□□□□ 0.63
Hfm1D3Z4R1 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hfm1D3Z4R1 Snord83b-201ENSMUST00000104546 94 ntBASIC19■□□□□ 0.63
Hfm1D3Z4R1 Gm12134-201ENSMUST00000122109 520 ntBASIC19■□□□□ 0.63
Hfm1D3Z4R1 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC19■□□□□ 0.63
Hfm1D3Z4R1 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC19■□□□□ 0.63
Hfm1D3Z4R1 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hfm1D3Z4R1 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hfm1D3Z4R1 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hfm1D3Z4R1 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hfm1D3Z4R1 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hfm1D3Z4R1 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
Hfm1D3Z4R1 Gm8862-201ENSMUST00000198379 1346 ntBASIC19■□□□□ 0.63
Hfm1D3Z4R1 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hfm1D3Z4R1 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC19■□□□□ 0.63
Hfm1D3Z4R1 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Hfm1D3Z4R1 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Hfm1D3Z4R1 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hfm1D3Z4R1 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hfm1D3Z4R1 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Hfm1D3Z4R1 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Hfm1D3Z4R1 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Hfm1D3Z4R1 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hfm1D3Z4R1 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC19■□□□□ 0.63
Hfm1D3Z4R1 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Hfm1D3Z4R1 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Hfm1D3Z4R1 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC19■□□□□ 0.63
Hfm1D3Z4R1 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Hfm1D3Z4R1 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
Hfm1D3Z4R1 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC19■□□□□ 0.63
Hfm1D3Z4R1 Gm31256-201ENSMUST00000194705 506 ntBASIC19■□□□□ 0.63
Hfm1D3Z4R1 AC069562.3-201ENSMUST00000225387 587 ntBASIC19■□□□□ 0.63
Hfm1D3Z4R1 AC126253.1-202ENSMUST00000226732 835 ntBASIC19■□□□□ 0.63
Hfm1D3Z4R1 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hfm1D3Z4R1 Gm15897-201ENSMUST00000117770 1486 ntBASIC19■□□□□ 0.63
Hfm1D3Z4R1 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hfm1D3Z4R1 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hfm1D3Z4R1 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hfm1D3Z4R1 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hfm1D3Z4R1 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Hfm1D3Z4R1 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hfm1D3Z4R1 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
Hfm1D3Z4R1 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
Hfm1D3Z4R1 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hfm1D3Z4R1 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC18.99■□□□□ 0.63
Hfm1D3Z4R1 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hfm1D3Z4R1 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
Hfm1D3Z4R1 Gm13570-201ENSMUST00000140763 309 ntBASIC18.99■□□□□ 0.63
Hfm1D3Z4R1 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Hfm1D3Z4R1 Gm25732-201ENSMUST00000175168 60 ntBASIC18.99■□□□□ 0.63
Hfm1D3Z4R1 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC18.99■□□□□ 0.63
Hfm1D3Z4R1 Gm18212-201ENSMUST00000211678 889 ntBASIC18.99■□□□□ 0.63
Hfm1D3Z4R1 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC18.99■□□□□ 0.63
Hfm1D3Z4R1 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Hfm1D3Z4R1 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hfm1D3Z4R1 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hfm1D3Z4R1 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Hfm1D3Z4R1 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hfm1D3Z4R1 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hfm1D3Z4R1 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hfm1D3Z4R1 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hfm1D3Z4R1 Gm12620-201ENSMUST00000119791 1986 ntBASIC18.98■□□□□ 0.63
Hfm1D3Z4R1 Gm12612-201ENSMUST00000140182 1986 ntBASIC18.98■□□□□ 0.63
Hfm1D3Z4R1 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hfm1D3Z4R1 Gm23270-201ENSMUST00000104055 131 ntBASIC18.98■□□□□ 0.63
Hfm1D3Z4R1 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC18.98■□□□□ 0.63
Hfm1D3Z4R1 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Hfm1D3Z4R1 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hfm1D3Z4R1 Gm14263-201ENSMUST00000117955 746 ntBASIC18.98■□□□□ 0.63
Hfm1D3Z4R1 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Hfm1D3Z4R1 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hfm1D3Z4R1 Gm43947-201ENSMUST00000203019 959 ntBASIC18.98■□□□□ 0.63
Hfm1D3Z4R1 Gm45504-201ENSMUST00000211407 2107 ntBASIC18.98■□□□□ 0.63
Hfm1D3Z4R1 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC18.98■□□□□ 0.63
Hfm1D3Z4R1 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hfm1D3Z4R1 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC18.98■□□□□ 0.63
Hfm1D3Z4R1 AC139350.1-201ENSMUST00000227064 1594 ntBASIC18.98■□□□□ 0.63
Hfm1D3Z4R1 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Hfm1D3Z4R1 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Hfm1D3Z4R1 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hfm1D3Z4R1 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Hfm1D3Z4R1 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hfm1D3Z4R1 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hfm1D3Z4R1 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hfm1D3Z4R1 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Hfm1D3Z4R1 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Hfm1D3Z4R1 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Hfm1D3Z4R1 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hfm1D3Z4R1 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hfm1D3Z4R1 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms