Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Shank1D3YZU1 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shank1D3YZU1 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Shank1D3YZU1 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shank1D3YZU1 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Shank1D3YZU1 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shank1D3YZU1 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shank1D3YZU1 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.34□□□□□ -0.43
Shank1D3YZU1 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Shank1D3YZU1 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Shank1D3YZU1 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shank1D3YZU1 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shank1D3YZU1 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shank1D3YZU1 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.34□□□□□ -0.43
Shank1D3YZU1 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Shank1D3YZU1 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shank1D3YZU1 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shank1D3YZU1 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.34□□□□□ -0.43
Shank1D3YZU1 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shank1D3YZU1 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shank1D3YZU1 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Shank1D3YZU1 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.34□□□□□ -0.43
Shank1D3YZU1 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shank1D3YZU1 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.34□□□□□ -0.43
Shank1D3YZU1 Mir497b-201ENSMUST00000093601 125 ntBASIC12.34□□□□□ -0.43
Shank1D3YZU1 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shank1D3YZU1 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shank1D3YZU1 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shank1D3YZU1 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shank1D3YZU1 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shank1D3YZU1 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Shank1D3YZU1 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Shank1D3YZU1 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Shank1D3YZU1 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shank1D3YZU1 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Shank1D3YZU1 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.33□□□□□ -0.44
Shank1D3YZU1 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.33□□□□□ -0.44
Shank1D3YZU1 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shank1D3YZU1 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.33□□□□□ -0.44
Shank1D3YZU1 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shank1D3YZU1 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Shank1D3YZU1 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Shank1D3YZU1 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shank1D3YZU1 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shank1D3YZU1 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shank1D3YZU1 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shank1D3YZU1 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shank1D3YZU1 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Shank1D3YZU1 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Shank1D3YZU1 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shank1D3YZU1 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.33□□□□□ -0.44
Shank1D3YZU1 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shank1D3YZU1 Mir686-201ENSMUST00000102174 109 ntBASIC12.33□□□□□ -0.44
Shank1D3YZU1 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Shank1D3YZU1 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.33□□□□□ -0.44
Shank1D3YZU1 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Shank1D3YZU1 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Shank1D3YZU1 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.33□□□□□ -0.44
Shank1D3YZU1 Gm44397-201ENSMUST00000195950 113 ntBASIC12.33□□□□□ -0.44
Shank1D3YZU1 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.33□□□□□ -0.44
Shank1D3YZU1 Gm45865-201ENSMUST00000211815 945 ntBASIC12.33□□□□□ -0.44
Shank1D3YZU1 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.33□□□□□ -0.44
Shank1D3YZU1 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.33□□□□□ -0.44
Shank1D3YZU1 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.33□□□□□ -0.44
Shank1D3YZU1 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shank1D3YZU1 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Shank1D3YZU1 CT010478.1-201ENSMUST00000220747 2787 ntBASIC12.33□□□□□ -0.44
Shank1D3YZU1 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Shank1D3YZU1 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Shank1D3YZU1 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Shank1D3YZU1 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Shank1D3YZU1 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shank1D3YZU1 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Shank1D3YZU1 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shank1D3YZU1 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shank1D3YZU1 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shank1D3YZU1 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shank1D3YZU1 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shank1D3YZU1 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Shank1D3YZU1 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Shank1D3YZU1 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shank1D3YZU1 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Shank1D3YZU1 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shank1D3YZU1 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shank1D3YZU1 Gm44364-201ENSMUST00000198368 141 ntBASIC12.32□□□□□ -0.44
Shank1D3YZU1 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.32□□□□□ -0.44
Shank1D3YZU1 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shank1D3YZU1 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shank1D3YZU1 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.32□□□□□ -0.44
Shank1D3YZU1 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Shank1D3YZU1 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shank1D3YZU1 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shank1D3YZU1 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Shank1D3YZU1 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.32□□□□□ -0.44
Shank1D3YZU1 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shank1D3YZU1 Gm11793-201ENSMUST00000120433 981 ntBASIC12.32□□□□□ -0.44
Shank1D3YZU1 Gm13342-201ENSMUST00000121055 207 ntBASIC12.32□□□□□ -0.44
Shank1D3YZU1 Gm10156-201ENSMUST00000122364 462 ntBASIC12.32□□□□□ -0.44
Shank1D3YZU1 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Shank1D3YZU1 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms