Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.22□□□□□ -0.13
Snf8Q9CZ28 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.22□□□□□ -0.13
Snf8Q9CZ28 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Snf8Q9CZ28 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Snf8Q9CZ28 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Snf8Q9CZ28 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Snf8Q9CZ28 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Snf8Q9CZ28 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Snf8Q9CZ28 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Snf8Q9CZ28 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Snf8Q9CZ28 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Snf8Q9CZ28 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Snf8Q9CZ28 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Snf8Q9CZ28 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Snf8Q9CZ28 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Snf8Q9CZ28 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Snf8Q9CZ28 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Snf8Q9CZ28 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Snf8Q9CZ28 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.21□□□□□ -0.13
Snf8Q9CZ28 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Snf8Q9CZ28 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Snf8Q9CZ28 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Snf8Q9CZ28 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Snf8Q9CZ28 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Snf8Q9CZ28 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Snf8Q9CZ28 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Snf8Q9CZ28 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Snf8Q9CZ28 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.21□□□□□ -0.13
Snf8Q9CZ28 Gm8000-201ENSMUST00000188378 592 ntBASIC14.21□□□□□ -0.13
Snf8Q9CZ28 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.21□□□□□ -0.13
Snf8Q9CZ28 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Snf8Q9CZ28 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Snf8Q9CZ28 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Snf8Q9CZ28 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Snf8Q9CZ28 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Snf8Q9CZ28 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Snf8Q9CZ28 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Snf8Q9CZ28 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Snf8Q9CZ28 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Snf8Q9CZ28 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Snf8Q9CZ28 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Snf8Q9CZ28 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Snf8Q9CZ28 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Snf8Q9CZ28 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Snf8Q9CZ28 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Snf8Q9CZ28 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Snf8Q9CZ28 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Snf8Q9CZ28 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Snf8Q9CZ28 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Snf8Q9CZ28 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Snf8Q9CZ28 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.2□□□□□ -0.14
Snf8Q9CZ28 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Snf8Q9CZ28 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Snf8Q9CZ28 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Snf8Q9CZ28 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.2□□□□□ -0.14
Snf8Q9CZ28 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Snf8Q9CZ28 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Snf8Q9CZ28 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Snf8Q9CZ28 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Snf8Q9CZ28 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Snf8Q9CZ28 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Snf8Q9CZ28 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Snf8Q9CZ28 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Snf8Q9CZ28 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Snf8Q9CZ28 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Snf8Q9CZ28 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Snf8Q9CZ28 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Snf8Q9CZ28 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.2□□□□□ -0.14
Snf8Q9CZ28 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.2□□□□□ -0.14
Snf8Q9CZ28 Gm45612-201ENSMUST00000211320 160 ntBASIC14.2□□□□□ -0.14
Snf8Q9CZ28 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.2□□□□□ -0.14
Snf8Q9CZ28 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Snf8Q9CZ28 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Snf8Q9CZ28 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Snf8Q9CZ28 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Snf8Q9CZ28 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Snf8Q9CZ28 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Snf8Q9CZ28 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Snf8Q9CZ28 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Snf8Q9CZ28 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Snf8Q9CZ28 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Snf8Q9CZ28 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Snf8Q9CZ28 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Snf8Q9CZ28 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Snf8Q9CZ28 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Snf8Q9CZ28 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.2□□□□□ -0.14
Snf8Q9CZ28 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Snf8Q9CZ28 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Snf8Q9CZ28 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Snf8Q9CZ28 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Snf8Q9CZ28 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Snf8Q9CZ28 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Snf8Q9CZ28 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Snf8Q9CZ28 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Snf8Q9CZ28 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Snf8Q9CZ28 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Snf8Q9CZ28 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.19□□□□□ -0.14
Snf8Q9CZ28 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Snf8Q9CZ28 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Snf8Q9CZ28 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms