Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Khdc3Q9CWU5 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Khdc3Q9CWU5 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.26□□□□□ -0.29
Khdc3Q9CWU5 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Khdc3Q9CWU5 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Khdc3Q9CWU5 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Khdc3Q9CWU5 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Khdc3Q9CWU5 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.26□□□□□ -0.29
Khdc3Q9CWU5 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Khdc3Q9CWU5 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Khdc3Q9CWU5 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Khdc3Q9CWU5 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.26□□□□□ -0.29
Khdc3Q9CWU5 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Khdc3Q9CWU5 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Khdc3Q9CWU5 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Khdc3Q9CWU5 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Khdc3Q9CWU5 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.26□□□□□ -0.29
Khdc3Q9CWU5 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.26□□□□□ -0.29
Khdc3Q9CWU5 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Khdc3Q9CWU5 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Khdc3Q9CWU5 Gm6888-201ENSMUST00000221983 706 ntBASIC13.26□□□□□ -0.29
Khdc3Q9CWU5 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Khdc3Q9CWU5 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Khdc3Q9CWU5 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Khdc3Q9CWU5 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Khdc3Q9CWU5 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Khdc3Q9CWU5 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Khdc3Q9CWU5 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Khdc3Q9CWU5 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Khdc3Q9CWU5 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.26□□□□□ -0.29
Khdc3Q9CWU5 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Khdc3Q9CWU5 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Khdc3Q9CWU5 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc3Q9CWU5 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.25□□□□□ -0.29
Khdc3Q9CWU5 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc3Q9CWU5 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc3Q9CWU5 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc3Q9CWU5 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc3Q9CWU5 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc3Q9CWU5 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc3Q9CWU5 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Khdc3Q9CWU5 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc3Q9CWU5 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc3Q9CWU5 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc3Q9CWU5 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc3Q9CWU5 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc3Q9CWU5 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc3Q9CWU5 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc3Q9CWU5 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Khdc3Q9CWU5 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Khdc3Q9CWU5 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc3Q9CWU5 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc3Q9CWU5 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc3Q9CWU5 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc3Q9CWU5 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.25□□□□□ -0.29
Khdc3Q9CWU5 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.25□□□□□ -0.29
Khdc3Q9CWU5 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc3Q9CWU5 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc3Q9CWU5 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Khdc3Q9CWU5 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.25□□□□□ -0.29
Khdc3Q9CWU5 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc3Q9CWU5 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc3Q9CWU5 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc3Q9CWU5 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc3Q9CWU5 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Khdc3Q9CWU5 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.25□□□□□ -0.29
Khdc3Q9CWU5 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc3Q9CWU5 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Khdc3Q9CWU5 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc3Q9CWU5 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc3Q9CWU5 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.25□□□□□ -0.29
Khdc3Q9CWU5 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc3Q9CWU5 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc3Q9CWU5 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc3Q9CWU5 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc3Q9CWU5 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc3Q9CWU5 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc3Q9CWU5 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc3Q9CWU5 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Khdc3Q9CWU5 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Khdc3Q9CWU5 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Khdc3Q9CWU5 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Khdc3Q9CWU5 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
Khdc3Q9CWU5 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Khdc3Q9CWU5 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Khdc3Q9CWU5 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Khdc3Q9CWU5 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Khdc3Q9CWU5 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.24□□□□□ -0.29
Khdc3Q9CWU5 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Khdc3Q9CWU5 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Khdc3Q9CWU5 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Khdc3Q9CWU5 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Khdc3Q9CWU5 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Khdc3Q9CWU5 Gm15460-201ENSMUST00000118147 391 ntBASIC13.24□□□□□ -0.29
Khdc3Q9CWU5 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.24□□□□□ -0.29
Khdc3Q9CWU5 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Khdc3Q9CWU5 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Khdc3Q9CWU5 Gm9229-201ENSMUST00000222777 126 ntBASIC13.24□□□□□ -0.29
Khdc3Q9CWU5 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.24□□□□□ -0.29
Khdc3Q9CWU5 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms