Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC15.74■□□□□ 0.11
Trim11Q99PQ2 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15.74■□□□□ 0.11
Trim11Q99PQ2 Gm21470-201ENSMUST00000187680 696 ntBASIC15.74■□□□□ 0.11
Trim11Q99PQ2 Gm37444-201ENSMUST00000193605 439 ntBASIC15.74■□□□□ 0.11
Trim11Q99PQ2 Gm46209-201ENSMUST00000217912 553 ntBASIC15.74■□□□□ 0.11
Trim11Q99PQ2 AC166997.1-201ENSMUST00000225122 572 ntBASIC15.74■□□□□ 0.11
Trim11Q99PQ2 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim11Q99PQ2 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trim11Q99PQ2 Mir497b-201ENSMUST00000093601 125 ntBASIC15.74■□□□□ 0.11
Trim11Q99PQ2 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim11Q99PQ2 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim11Q99PQ2 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim11Q99PQ2 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Trim11Q99PQ2 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC15.74■□□□□ 0.11
Trim11Q99PQ2 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC15.74■□□□□ 0.11
Trim11Q99PQ2 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim11Q99PQ2 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim11Q99PQ2 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim11Q99PQ2 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trim11Q99PQ2 Gm8337-201ENSMUST00000187358 1938 ntBASIC15.74■□□□□ 0.11
Trim11Q99PQ2 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim11Q99PQ2 CT030684.3-201ENSMUST00000227308 2445 ntBASIC15.74■□□□□ 0.11
Trim11Q99PQ2 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim11Q99PQ2 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trim11Q99PQ2 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim11Q99PQ2 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim11Q99PQ2 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim11Q99PQ2 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trim11Q99PQ2 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trim11Q99PQ2 Fgf17-202ENSMUST00000227123 1336 ntBASIC15.73■□□□□ 0.11
Trim11Q99PQ2 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trim11Q99PQ2 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim11Q99PQ2 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trim11Q99PQ2 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim11Q99PQ2 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC15.73■□□□□ 0.11
Trim11Q99PQ2 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
Trim11Q99PQ2 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Trim11Q99PQ2 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC15.73■□□□□ 0.11
Trim11Q99PQ2 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC15.73■□□□□ 0.11
Trim11Q99PQ2 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC15.73■□□□□ 0.11
Trim11Q99PQ2 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC15.73■□□□□ 0.11
Trim11Q99PQ2 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trim11Q99PQ2 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim11Q99PQ2 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Trim11Q99PQ2 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trim11Q99PQ2 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Trim11Q99PQ2 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
Trim11Q99PQ2 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim11Q99PQ2 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trim11Q99PQ2 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Trim11Q99PQ2 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trim11Q99PQ2 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trim11Q99PQ2 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim11Q99PQ2 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim11Q99PQ2 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim11Q99PQ2 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim11Q99PQ2 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim11Q99PQ2 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim11Q99PQ2 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim11Q99PQ2 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim11Q99PQ2 Gm37691-201ENSMUST00000192147 2573 ntBASIC15.72■□□□□ 0.11
Trim11Q99PQ2 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim11Q99PQ2 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim11Q99PQ2 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC15.72■□□□□ 0.11
Trim11Q99PQ2 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim11Q99PQ2 AC124732.2-201ENSMUST00000221977 316 ntBASIC15.72■□□□□ 0.11
Trim11Q99PQ2 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim11Q99PQ2 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trim11Q99PQ2 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim11Q99PQ2 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim11Q99PQ2 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim11Q99PQ2 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim11Q99PQ2 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim11Q99PQ2 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trim11Q99PQ2 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim11Q99PQ2 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim11Q99PQ2 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim11Q99PQ2 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim11Q99PQ2 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim11Q99PQ2 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim11Q99PQ2 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trim11Q99PQ2 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim11Q99PQ2 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim11Q99PQ2 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim11Q99PQ2 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim11Q99PQ2 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim11Q99PQ2 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim11Q99PQ2 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trim11Q99PQ2 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim11Q99PQ2 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim11Q99PQ2 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim11Q99PQ2 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Trim11Q99PQ2 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim11Q99PQ2 Gm7820-201ENSMUST00000121012 1052 ntBASIC15.71■□□□□ 0.11
Trim11Q99PQ2 Gm6283-201ENSMUST00000182369 1000 ntBASIC15.71■□□□□ 0.11
Trim11Q99PQ2 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC15.71■□□□□ 0.11
Trim11Q99PQ2 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim11Q99PQ2 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim11Q99PQ2 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trim11Q99PQ2 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms