Protein–RNA interactions for Protein: Q99JY4

Trabd, TraB domain-containing protein, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TrabdQ99JY4 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TrabdQ99JY4 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TrabdQ99JY4 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TrabdQ99JY4 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TrabdQ99JY4 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TrabdQ99JY4 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TrabdQ99JY4 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TrabdQ99JY4 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
TrabdQ99JY4 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TrabdQ99JY4 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TrabdQ99JY4 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TrabdQ99JY4 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TrabdQ99JY4 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
TrabdQ99JY4 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TrabdQ99JY4 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TrabdQ99JY4 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TrabdQ99JY4 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
TrabdQ99JY4 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TrabdQ99JY4 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TrabdQ99JY4 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TrabdQ99JY4 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TrabdQ99JY4 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
TrabdQ99JY4 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TrabdQ99JY4 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TrabdQ99JY4 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
TrabdQ99JY4 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TrabdQ99JY4 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TrabdQ99JY4 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TrabdQ99JY4 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.32□□□□□ -0.12
TrabdQ99JY4 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TrabdQ99JY4 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TrabdQ99JY4 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.32□□□□□ -0.12
TrabdQ99JY4 Gm8602-201ENSMUST00000184045 607 ntBASIC14.32□□□□□ -0.12
TrabdQ99JY4 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TrabdQ99JY4 Gm5161-201ENSMUST00000075243 853 ntBASIC14.32□□□□□ -0.12
TrabdQ99JY4 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TrabdQ99JY4 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TrabdQ99JY4 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TrabdQ99JY4 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TrabdQ99JY4 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TrabdQ99JY4 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TrabdQ99JY4 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TrabdQ99JY4 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TrabdQ99JY4 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TrabdQ99JY4 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TrabdQ99JY4 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TrabdQ99JY4 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.32□□□□□ -0.12
TrabdQ99JY4 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TrabdQ99JY4 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TrabdQ99JY4 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TrabdQ99JY4 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TrabdQ99JY4 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TrabdQ99JY4 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
TrabdQ99JY4 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TrabdQ99JY4 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TrabdQ99JY4 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
TrabdQ99JY4 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TrabdQ99JY4 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TrabdQ99JY4 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TrabdQ99JY4 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TrabdQ99JY4 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TrabdQ99JY4 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TrabdQ99JY4 Gm15770-201ENSMUST00000117498 584 ntBASIC14.31□□□□□ -0.12
TrabdQ99JY4 Gm14127-201ENSMUST00000117906 678 ntBASIC14.31□□□□□ -0.12
TrabdQ99JY4 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.31□□□□□ -0.12
TrabdQ99JY4 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.31□□□□□ -0.12
TrabdQ99JY4 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TrabdQ99JY4 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.31□□□□□ -0.12
TrabdQ99JY4 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.31□□□□□ -0.12
TrabdQ99JY4 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TrabdQ99JY4 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TrabdQ99JY4 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.31□□□□□ -0.12
TrabdQ99JY4 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TrabdQ99JY4 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TrabdQ99JY4 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.31□□□□□ -0.12
TrabdQ99JY4 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TrabdQ99JY4 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TrabdQ99JY4 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TrabdQ99JY4 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TrabdQ99JY4 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TrabdQ99JY4 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TrabdQ99JY4 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.31□□□□□ -0.12
TrabdQ99JY4 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TrabdQ99JY4 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TrabdQ99JY4 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TrabdQ99JY4 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TrabdQ99JY4 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.31□□□□□ -0.12
TrabdQ99JY4 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TrabdQ99JY4 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TrabdQ99JY4 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TrabdQ99JY4 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TrabdQ99JY4 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TrabdQ99JY4 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TrabdQ99JY4 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TrabdQ99JY4 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TrabdQ99JY4 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.3□□□□□ -0.12
TrabdQ99JY4 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TrabdQ99JY4 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TrabdQ99JY4 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TrabdQ99JY4 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms