Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lims1Q99JW4 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.59□□□□□ -0.39
Lims1Q99JW4 Gm18766-201ENSMUST00000189811 808 ntBASIC12.59□□□□□ -0.39
Lims1Q99JW4 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.59□□□□□ -0.39
Lims1Q99JW4 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lims1Q99JW4 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lims1Q99JW4 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lims1Q99JW4 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lims1Q99JW4 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Lims1Q99JW4 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lims1Q99JW4 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lims1Q99JW4 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lims1Q99JW4 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Lims1Q99JW4 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Lims1Q99JW4 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Lims1Q99JW4 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lims1Q99JW4 Syt7-205ENSMUST00000224135 1557 ntBASIC12.59□□□□□ -0.39
Lims1Q99JW4 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lims1Q99JW4 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lims1Q99JW4 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lims1Q99JW4 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lims1Q99JW4 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Lims1Q99JW4 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.58□□□□□ -0.39
Lims1Q99JW4 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Lims1Q99JW4 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Lims1Q99JW4 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lims1Q99JW4 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Lims1Q99JW4 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lims1Q99JW4 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lims1Q99JW4 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.58□□□□□ -0.4
Lims1Q99JW4 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.58□□□□□ -0.4
Lims1Q99JW4 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Lims1Q99JW4 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lims1Q99JW4 Gm9719-201ENSMUST00000162765 543 ntBASIC12.58□□□□□ -0.4
Lims1Q99JW4 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.58□□□□□ -0.4
Lims1Q99JW4 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.58□□□□□ -0.4
Lims1Q99JW4 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lims1Q99JW4 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lims1Q99JW4 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lims1Q99JW4 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lims1Q99JW4 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.58□□□□□ -0.4
Lims1Q99JW4 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lims1Q99JW4 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Lims1Q99JW4 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Lims1Q99JW4 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Lims1Q99JW4 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lims1Q99JW4 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lims1Q99JW4 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Lims1Q99JW4 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Lims1Q99JW4 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lims1Q99JW4 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lims1Q99JW4 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lims1Q99JW4 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lims1Q99JW4 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lims1Q99JW4 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lims1Q99JW4 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lims1Q99JW4 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lims1Q99JW4 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lims1Q99JW4 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lims1Q99JW4 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lims1Q99JW4 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.57□□□□□ -0.4
Lims1Q99JW4 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lims1Q99JW4 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lims1Q99JW4 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lims1Q99JW4 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lims1Q99JW4 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lims1Q99JW4 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lims1Q99JW4 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.57□□□□□ -0.4
Lims1Q99JW4 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Lims1Q99JW4 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Lims1Q99JW4 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.57□□□□□ -0.4
Lims1Q99JW4 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lims1Q99JW4 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Lims1Q99JW4 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Lims1Q99JW4 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.57□□□□□ -0.4
Lims1Q99JW4 Mir6990-201ENSMUST00000183724 91 ntBASIC12.57□□□□□ -0.4
Lims1Q99JW4 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.57□□□□□ -0.4
Lims1Q99JW4 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.57□□□□□ -0.4
Lims1Q99JW4 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Lims1Q99JW4 Gm16476-201ENSMUST00000221544 139 ntBASIC12.57□□□□□ -0.4
Lims1Q99JW4 Dupd1-202ENSMUST00000224735 548 ntBASIC12.57□□□□□ -0.4
Lims1Q99JW4 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lims1Q99JW4 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.57□□□□□ -0.4
Lims1Q99JW4 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Lims1Q99JW4 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lims1Q99JW4 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lims1Q99JW4 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lims1Q99JW4 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Lims1Q99JW4 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lims1Q99JW4 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lims1Q99JW4 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lims1Q99JW4 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lims1Q99JW4 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lims1Q99JW4 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Lims1Q99JW4 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lims1Q99JW4 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lims1Q99JW4 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lims1Q99JW4 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lims1Q99JW4 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lims1Q99JW4 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms