Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb20Q91XZ9 Gm20121-201ENSMUST00000198547 1594 ntBASIC13.67□□□□□ -0.22
Pcdhb20Q91XZ9 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb20Q91XZ9 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb20Q91XZ9 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb20Q91XZ9 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb20Q91XZ9 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Pcdhb20Q91XZ9 Gm15957-201ENSMUST00000118893 974 ntBASIC13.67□□□□□ -0.22
Pcdhb20Q91XZ9 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb20Q91XZ9 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb20Q91XZ9 Gm11655-201ENSMUST00000153899 765 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb20Q91XZ9 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb20Q91XZ9 Mir6977-201ENSMUST00000184960 64 ntBASIC13.67□□□□□ -0.22
Pcdhb20Q91XZ9 Mpzl1-203ENSMUST00000191818 853 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb20Q91XZ9 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.67□□□□□ -0.22
Pcdhb20Q91XZ9 Gm43811-201ENSMUST00000202862 695 ntBASIC13.67□□□□□ -0.22
Pcdhb20Q91XZ9 Gm45258-201ENSMUST00000210042 853 ntBASIC13.67□□□□□ -0.22
Pcdhb20Q91XZ9 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.67□□□□□ -0.22
Pcdhb20Q91XZ9 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.67□□□□□ -0.22
Pcdhb20Q91XZ9 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.67□□□□□ -0.22
Pcdhb20Q91XZ9 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb20Q91XZ9 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb20Q91XZ9 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb20Q91XZ9 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb20Q91XZ9 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Pcdhb20Q91XZ9 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb20Q91XZ9 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb20Q91XZ9 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb20Q91XZ9 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb20Q91XZ9 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Pcdhb20Q91XZ9 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb20Q91XZ9 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb20Q91XZ9 Gm45177-201ENSMUST00000209104 2307 ntBASIC13.67□□□□□ -0.22
Pcdhb20Q91XZ9 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb20Q91XZ9 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb20Q91XZ9 Milr1-201ENSMUST00000086353 1348 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb20Q91XZ9 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb20Q91XZ9 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb20Q91XZ9 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb20Q91XZ9 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb20Q91XZ9 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb20Q91XZ9 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Pcdhb20Q91XZ9 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb20Q91XZ9 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb20Q91XZ9 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb20Q91XZ9 Gm7714-201ENSMUST00000169154 685 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb20Q91XZ9 Gm27838-201ENSMUST00000184829 128 ntBASIC13.66□□□□□ -0.22
Pcdhb20Q91XZ9 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC13.66□□□□□ -0.22
Pcdhb20Q91XZ9 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.66□□□□□ -0.22
Pcdhb20Q91XZ9 Gm34165-201ENSMUST00000222012 1174 ntBASIC13.66□□□□□ -0.22
Pcdhb20Q91XZ9 AC154527.3-201ENSMUST00000225519 989 ntBASIC13.66□□□□□ -0.22
Pcdhb20Q91XZ9 AC156574.1-201ENSMUST00000227084 452 ntBASIC13.66□□□□□ -0.22
Pcdhb20Q91XZ9 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb20Q91XZ9 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb20Q91XZ9 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb20Q91XZ9 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb20Q91XZ9 Wfdc12-201ENSMUST00000051272 775 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb20Q91XZ9 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.66□□□□□ -0.22
Pcdhb20Q91XZ9 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb20Q91XZ9 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb20Q91XZ9 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb20Q91XZ9 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb20Q91XZ9 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb20Q91XZ9 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Pcdhb20Q91XZ9 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Pcdhb20Q91XZ9 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb20Q91XZ9 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb20Q91XZ9 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Pcdhb20Q91XZ9 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb20Q91XZ9 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb20Q91XZ9 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhb20Q91XZ9 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb20Q91XZ9 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Pcdhb20Q91XZ9 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Pcdhb20Q91XZ9 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb20Q91XZ9 4930593A02Rik-201ENSMUST00000181694 1437 ntTSL 5 BASIC13.65□□□□□ -0.22
Pcdhb20Q91XZ9 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb20Q91XZ9 Gm10652-201ENSMUST00000199790 2622 ntBASIC13.65□□□□□ -0.22
Pcdhb20Q91XZ9 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb20Q91XZ9 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Pcdhb20Q91XZ9 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb20Q91XZ9 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Pcdhb20Q91XZ9 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb20Q91XZ9 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb20Q91XZ9 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb20Q91XZ9 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb20Q91XZ9 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.65□□□□□ -0.22
Pcdhb20Q91XZ9 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb20Q91XZ9 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Pcdhb20Q91XZ9 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.65□□□□□ -0.22
Pcdhb20Q91XZ9 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.65□□□□□ -0.22
Pcdhb20Q91XZ9 Gm6098-201ENSMUST00000180234 330 ntBASIC13.65□□□□□ -0.22
Pcdhb20Q91XZ9 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC13.65□□□□□ -0.22
Pcdhb20Q91XZ9 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC13.65□□□□□ -0.22
Pcdhb20Q91XZ9 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC13.65□□□□□ -0.22
Pcdhb20Q91XZ9 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.65□□□□□ -0.22
Pcdhb20Q91XZ9 Gm6916-202ENSMUST00000205523 195 ntBASIC13.65□□□□□ -0.22
Pcdhb20Q91XZ9 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.65□□□□□ -0.22
Pcdhb20Q91XZ9 Mrpl42-202ENSMUST00000217777 455 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb20Q91XZ9 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms