Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Rpap2Q8VC34 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rpap2Q8VC34 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpap2Q8VC34 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpap2Q8VC34 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpap2Q8VC34 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpap2Q8VC34 Gm10729-202ENSMUST00000193403 1375 ntBASIC15.13■□□□□ 0.01
Rpap2Q8VC34 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Rpap2Q8VC34 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Rpap2Q8VC34 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Rpap2Q8VC34 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.13■□□□□ 0.01
Rpap2Q8VC34 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Rpap2Q8VC34 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpap2Q8VC34 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Rpap2Q8VC34 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC15.13■□□□□ 0.01
Rpap2Q8VC34 Gm27772-201ENSMUST00000184900 187 ntBASIC15.13■□□□□ 0.01
Rpap2Q8VC34 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpap2Q8VC34 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rpap2Q8VC34 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Rpap2Q8VC34 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpap2Q8VC34 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC15.13■□□□□ 0.01
Rpap2Q8VC34 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC15.13■□□□□ 0.01
Rpap2Q8VC34 AC154621.1-201ENSMUST00000226155 1119 ntBASIC15.13■□□□□ 0.01
Rpap2Q8VC34 AC158982.1-201ENSMUST00000228377 901 ntBASIC15.13■□□□□ 0.01
Rpap2Q8VC34 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC15.13■□□□□ 0.01
Rpap2Q8VC34 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Rpap2Q8VC34 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpap2Q8VC34 Gm19863-201ENSMUST00000192480 2218 ntBASIC15.13■□□□□ 0.01
Rpap2Q8VC34 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rpap2Q8VC34 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpap2Q8VC34 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpap2Q8VC34 Il17rd-203ENSMUST00000225146 3366 ntBASIC15.13■□□□□ 0.01
Rpap2Q8VC34 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpap2Q8VC34 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC15.13■□□□□ 0.01
Rpap2Q8VC34 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC15.12■□□□□ 0.01
Rpap2Q8VC34 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rpap2Q8VC34 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpap2Q8VC34 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpap2Q8VC34 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpap2Q8VC34 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpap2Q8VC34 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rpap2Q8VC34 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpap2Q8VC34 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpap2Q8VC34 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpap2Q8VC34 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpap2Q8VC34 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpap2Q8VC34 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpap2Q8VC34 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpap2Q8VC34 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpap2Q8VC34 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
Rpap2Q8VC34 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rpap2Q8VC34 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Rpap2Q8VC34 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC15.12■□□□□ 0.01
Rpap2Q8VC34 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpap2Q8VC34 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC15.12■□□□□ 0.01
Rpap2Q8VC34 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpap2Q8VC34 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpap2Q8VC34 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpap2Q8VC34 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpap2Q8VC34 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpap2Q8VC34 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpap2Q8VC34 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Rpap2Q8VC34 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpap2Q8VC34 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpap2Q8VC34 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC15.12■□□□□ 0.01
Rpap2Q8VC34 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpap2Q8VC34 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpap2Q8VC34 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpap2Q8VC34 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Rpap2Q8VC34 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpap2Q8VC34 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Rpap2Q8VC34 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpap2Q8VC34 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpap2Q8VC34 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Rpap2Q8VC34 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpap2Q8VC34 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rpap2Q8VC34 Gm22189-201ENSMUST00000103822 86 ntBASIC15.11■□□□□ 0.01
Rpap2Q8VC34 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC15.11■□□□□ 0.01
Rpap2Q8VC34 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC15.11■□□□□ 0.01
Rpap2Q8VC34 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC15.11■□□□□ 0.01
Rpap2Q8VC34 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpap2Q8VC34 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC15.11■□□□□ 0.01
Rpap2Q8VC34 Gm45195-201ENSMUST00000205597 1008 ntBASIC15.11■□□□□ 0.01
Rpap2Q8VC34 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Rpap2Q8VC34 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC15.11■□□□□ 0.01
Rpap2Q8VC34 AC139580.1-202ENSMUST00000223574 928 ntBASIC15.11■□□□□ 0.01
Rpap2Q8VC34 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpap2Q8VC34 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Rpap2Q8VC34 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Rpap2Q8VC34 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpap2Q8VC34 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpap2Q8VC34 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpap2Q8VC34 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpap2Q8VC34 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Rpap2Q8VC34 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpap2Q8VC34 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpap2Q8VC34 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Rpap2Q8VC34 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Rpap2Q8VC34 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpap2Q8VC34 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms