Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf4Q8K4J2 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf4Q8K4J2 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf4Q8K4J2 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf4Q8K4J2 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf4Q8K4J2 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.57□□□□□ -0.4
Ebf4Q8K4J2 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC12.57□□□□□ -0.4
Ebf4Q8K4J2 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf4Q8K4J2 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf4Q8K4J2 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC12.57□□□□□ -0.4
Ebf4Q8K4J2 Gm17807-201ENSMUST00000186869 298 ntBASIC12.57□□□□□ -0.4
Ebf4Q8K4J2 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC12.57□□□□□ -0.4
Ebf4Q8K4J2 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf4Q8K4J2 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.57□□□□□ -0.4
Ebf4Q8K4J2 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ebf4Q8K4J2 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf4Q8K4J2 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf4Q8K4J2 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf4Q8K4J2 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.57□□□□□ -0.4
Ebf4Q8K4J2 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf4Q8K4J2 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf4Q8K4J2 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf4Q8K4J2 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf4Q8K4J2 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf4Q8K4J2 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf4Q8K4J2 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ebf4Q8K4J2 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ebf4Q8K4J2 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ebf4Q8K4J2 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf4Q8K4J2 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf4Q8K4J2 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.56□□□□□ -0.4
Ebf4Q8K4J2 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf4Q8K4J2 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf4Q8K4J2 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf4Q8K4J2 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf4Q8K4J2 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf4Q8K4J2 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf4Q8K4J2 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf4Q8K4J2 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf4Q8K4J2 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf4Q8K4J2 Gm12882-201ENSMUST00000121696 517 ntBASIC12.56□□□□□ -0.4
Ebf4Q8K4J2 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf4Q8K4J2 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC12.56□□□□□ -0.4
Ebf4Q8K4J2 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.56□□□□□ -0.4
Ebf4Q8K4J2 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.56□□□□□ -0.4
Ebf4Q8K4J2 Gm2272-201ENSMUST00000194903 582 ntBASIC12.56□□□□□ -0.4
Ebf4Q8K4J2 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf4Q8K4J2 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf4Q8K4J2 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf4Q8K4J2 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ebf4Q8K4J2 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf4Q8K4J2 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf4Q8K4J2 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf4Q8K4J2 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf4Q8K4J2 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf4Q8K4J2 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf4Q8K4J2 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf4Q8K4J2 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf4Q8K4J2 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf4Q8K4J2 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ebf4Q8K4J2 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf4Q8K4J2 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf4Q8K4J2 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Ebf4Q8K4J2 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.55□□□□□ -0.4
Ebf4Q8K4J2 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf4Q8K4J2 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf4Q8K4J2 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Ebf4Q8K4J2 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ebf4Q8K4J2 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.55□□□□□ -0.4
Ebf4Q8K4J2 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.55□□□□□ -0.4
Ebf4Q8K4J2 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf4Q8K4J2 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf4Q8K4J2 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ebf4Q8K4J2 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf4Q8K4J2 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf4Q8K4J2 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf4Q8K4J2 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf4Q8K4J2 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.55□□□□□ -0.4
Ebf4Q8K4J2 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC12.55□□□□□ -0.4
Ebf4Q8K4J2 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.55□□□□□ -0.4
Ebf4Q8K4J2 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC12.55□□□□□ -0.4
Ebf4Q8K4J2 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf4Q8K4J2 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ebf4Q8K4J2 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.55□□□□□ -0.4
Ebf4Q8K4J2 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.55□□□□□ -0.4
Ebf4Q8K4J2 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf4Q8K4J2 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.55□□□□□ -0.4
Ebf4Q8K4J2 Gm10154-201ENSMUST00000084445 354 ntBASIC12.55□□□□□ -0.4
Ebf4Q8K4J2 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.55□□□□□ -0.4
Ebf4Q8K4J2 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Ebf4Q8K4J2 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf4Q8K4J2 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf4Q8K4J2 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf4Q8K4J2 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf4Q8K4J2 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf4Q8K4J2 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.55□□□□□ -0.4
Ebf4Q8K4J2 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf4Q8K4J2 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf4Q8K4J2 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf4Q8K4J2 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms