Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clrn1Q8K445 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clrn1Q8K445 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Clrn1Q8K445 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clrn1Q8K445 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clrn1Q8K445 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Clrn1Q8K445 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clrn1Q8K445 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clrn1Q8K445 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Clrn1Q8K445 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Clrn1Q8K445 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clrn1Q8K445 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Clrn1Q8K445 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clrn1Q8K445 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clrn1Q8K445 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Clrn1Q8K445 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clrn1Q8K445 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clrn1Q8K445 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Clrn1Q8K445 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Clrn1Q8K445 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clrn1Q8K445 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.03□□□□□ -0.32
Clrn1Q8K445 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Clrn1Q8K445 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.03□□□□□ -0.32
Clrn1Q8K445 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Clrn1Q8K445 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clrn1Q8K445 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clrn1Q8K445 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clrn1Q8K445 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clrn1Q8K445 Gm12151-201ENSMUST00000121374 290 ntBASIC13.03□□□□□ -0.32
Clrn1Q8K445 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Clrn1Q8K445 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.03□□□□□ -0.32
Clrn1Q8K445 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.03□□□□□ -0.32
Clrn1Q8K445 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.03□□□□□ -0.32
Clrn1Q8K445 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Clrn1Q8K445 Gm4804-201ENSMUST00000182234 999 ntBASIC13.03□□□□□ -0.32
Clrn1Q8K445 Gm27306-201ENSMUST00000183970 107 ntBASIC13.03□□□□□ -0.32
Clrn1Q8K445 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Clrn1Q8K445 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.03□□□□□ -0.32
Clrn1Q8K445 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.03□□□□□ -0.32
Clrn1Q8K445 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Clrn1Q8K445 Mir497b-201ENSMUST00000093601 125 ntBASIC13.03□□□□□ -0.32
Clrn1Q8K445 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clrn1Q8K445 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clrn1Q8K445 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clrn1Q8K445 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Clrn1Q8K445 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Clrn1Q8K445 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clrn1Q8K445 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Clrn1Q8K445 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.03□□□□□ -0.32
Clrn1Q8K445 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clrn1Q8K445 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clrn1Q8K445 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clrn1Q8K445 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clrn1Q8K445 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Clrn1Q8K445 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Clrn1Q8K445 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Clrn1Q8K445 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Clrn1Q8K445 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Clrn1Q8K445 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Clrn1Q8K445 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Clrn1Q8K445 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Clrn1Q8K445 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
Clrn1Q8K445 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Clrn1Q8K445 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Clrn1Q8K445 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Clrn1Q8K445 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.02□□□□□ -0.32
Clrn1Q8K445 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Clrn1Q8K445 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Clrn1Q8K445 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Clrn1Q8K445 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Clrn1Q8K445 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clrn1Q8K445 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.02□□□□□ -0.33
Clrn1Q8K445 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.02□□□□□ -0.33
Clrn1Q8K445 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.02□□□□□ -0.33
Clrn1Q8K445 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clrn1Q8K445 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clrn1Q8K445 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Clrn1Q8K445 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clrn1Q8K445 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clrn1Q8K445 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clrn1Q8K445 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Clrn1Q8K445 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Clrn1Q8K445 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Clrn1Q8K445 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Clrn1Q8K445 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clrn1Q8K445 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.02□□□□□ -0.33
Clrn1Q8K445 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clrn1Q8K445 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clrn1Q8K445 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Clrn1Q8K445 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clrn1Q8K445 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clrn1Q8K445 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.01□□□□□ -0.33
Clrn1Q8K445 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clrn1Q8K445 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.01□□□□□ -0.33
Clrn1Q8K445 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Clrn1Q8K445 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clrn1Q8K445 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clrn1Q8K445 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Clrn1Q8K445 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clrn1Q8K445 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms