Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfwd3Q8CIK8 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rfwd3Q8CIK8 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfwd3Q8CIK8 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rfwd3Q8CIK8 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfwd3Q8CIK8 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rfwd3Q8CIK8 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfwd3Q8CIK8 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Rfwd3Q8CIK8 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfwd3Q8CIK8 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rfwd3Q8CIK8 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfwd3Q8CIK8 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.01□□□□□ -0.33
Rfwd3Q8CIK8 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfwd3Q8CIK8 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Rfwd3Q8CIK8 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfwd3Q8CIK8 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfwd3Q8CIK8 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfwd3Q8CIK8 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfwd3Q8CIK8 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfwd3Q8CIK8 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.01□□□□□ -0.33
Rfwd3Q8CIK8 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfwd3Q8CIK8 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rfwd3Q8CIK8 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.01□□□□□ -0.33
Rfwd3Q8CIK8 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfwd3Q8CIK8 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfwd3Q8CIK8 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rfwd3Q8CIK8 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rfwd3Q8CIK8 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rfwd3Q8CIK8 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rfwd3Q8CIK8 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13□□□□□ -0.33
Rfwd3Q8CIK8 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Rfwd3Q8CIK8 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rfwd3Q8CIK8 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Rfwd3Q8CIK8 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rfwd3Q8CIK8 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rfwd3Q8CIK8 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rfwd3Q8CIK8 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13□□□□□ -0.33
Rfwd3Q8CIK8 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Rfwd3Q8CIK8 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rfwd3Q8CIK8 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Rfwd3Q8CIK8 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rfwd3Q8CIK8 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13□□□□□ -0.33
Rfwd3Q8CIK8 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13□□□□□ -0.33
Rfwd3Q8CIK8 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13□□□□□ -0.33
Rfwd3Q8CIK8 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rfwd3Q8CIK8 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13□□□□□ -0.33
Rfwd3Q8CIK8 Gm21470-201ENSMUST00000187680 696 ntBASIC13□□□□□ -0.33
Rfwd3Q8CIK8 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Rfwd3Q8CIK8 AC238811.1-201ENSMUST00000225302 441 ntBASIC13□□□□□ -0.33
Rfwd3Q8CIK8 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rfwd3Q8CIK8 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rfwd3Q8CIK8 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rfwd3Q8CIK8 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rfwd3Q8CIK8 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Rfwd3Q8CIK8 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Rfwd3Q8CIK8 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rfwd3Q8CIK8 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rfwd3Q8CIK8 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rfwd3Q8CIK8 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rfwd3Q8CIK8 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Rfwd3Q8CIK8 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfwd3Q8CIK8 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Rfwd3Q8CIK8 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfwd3Q8CIK8 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfwd3Q8CIK8 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfwd3Q8CIK8 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Rfwd3Q8CIK8 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfwd3Q8CIK8 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfwd3Q8CIK8 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfwd3Q8CIK8 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfwd3Q8CIK8 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rfwd3Q8CIK8 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfwd3Q8CIK8 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rfwd3Q8CIK8 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfwd3Q8CIK8 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfwd3Q8CIK8 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfwd3Q8CIK8 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.99□□□□□ -0.33
Rfwd3Q8CIK8 Gm14057-201ENSMUST00000120631 482 ntBASIC12.99□□□□□ -0.33
Rfwd3Q8CIK8 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfwd3Q8CIK8 Gm27838-201ENSMUST00000184829 128 ntBASIC12.99□□□□□ -0.33
Rfwd3Q8CIK8 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Rfwd3Q8CIK8 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.99□□□□□ -0.33
Rfwd3Q8CIK8 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.99□□□□□ -0.33
Rfwd3Q8CIK8 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.99□□□□□ -0.33
Rfwd3Q8CIK8 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.99□□□□□ -0.33
Rfwd3Q8CIK8 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rfwd3Q8CIK8 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Rfwd3Q8CIK8 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfwd3Q8CIK8 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rfwd3Q8CIK8 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfwd3Q8CIK8 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.99□□□□□ -0.33
Rfwd3Q8CIK8 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfwd3Q8CIK8 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfwd3Q8CIK8 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Rfwd3Q8CIK8 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfwd3Q8CIK8 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.99□□□□□ -0.33
Rfwd3Q8CIK8 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rfwd3Q8CIK8 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfwd3Q8CIK8 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Rfwd3Q8CIK8 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms