Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc60Q8C4J0 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc60Q8C4J0 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc60Q8C4J0 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Ccdc60Q8C4J0 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc60Q8C4J0 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc60Q8C4J0 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc60Q8C4J0 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC17.6■□□□□ 0.41
Ccdc60Q8C4J0 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc60Q8C4J0 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc60Q8C4J0 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc60Q8C4J0 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc60Q8C4J0 Il17rd-203ENSMUST00000225146 3366 ntBASIC17.6■□□□□ 0.41
Ccdc60Q8C4J0 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc60Q8C4J0 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc60Q8C4J0 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc60Q8C4J0 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc60Q8C4J0 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc60Q8C4J0 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc60Q8C4J0 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc60Q8C4J0 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc60Q8C4J0 AC166491.1-201ENSMUST00000227053 2308 ntBASIC17.59■□□□□ 0.41
Ccdc60Q8C4J0 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc60Q8C4J0 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc60Q8C4J0 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc60Q8C4J0 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC17.59■□□□□ 0.41
Ccdc60Q8C4J0 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc60Q8C4J0 Gm38037-201ENSMUST00000192600 1624 ntBASIC17.59■□□□□ 0.41
Ccdc60Q8C4J0 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc60Q8C4J0 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc60Q8C4J0 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC17.59■□□□□ 0.41
Ccdc60Q8C4J0 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Ccdc60Q8C4J0 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc60Q8C4J0 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc60Q8C4J0 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc60Q8C4J0 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc60Q8C4J0 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc60Q8C4J0 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc60Q8C4J0 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Ccdc60Q8C4J0 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc60Q8C4J0 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc60Q8C4J0 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc60Q8C4J0 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc60Q8C4J0 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc60Q8C4J0 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc60Q8C4J0 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc60Q8C4J0 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc60Q8C4J0 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc60Q8C4J0 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Ccdc60Q8C4J0 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc60Q8C4J0 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC17.58■□□□□ 0.41
Ccdc60Q8C4J0 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc60Q8C4J0 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc60Q8C4J0 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Ccdc60Q8C4J0 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc60Q8C4J0 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc60Q8C4J0 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
Ccdc60Q8C4J0 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc60Q8C4J0 Gm5866-201ENSMUST00000177881 973 ntBASIC17.58■□□□□ 0.4
Ccdc60Q8C4J0 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
Ccdc60Q8C4J0 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Ccdc60Q8C4J0 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc60Q8C4J0 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc60Q8C4J0 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Ccdc60Q8C4J0 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Ccdc60Q8C4J0 Gm12626-201ENSMUST00000117339 1983 ntBASIC17.58■□□□□ 0.4
Ccdc60Q8C4J0 Gm12623-201ENSMUST00000119849 1983 ntBASIC17.58■□□□□ 0.4
Ccdc60Q8C4J0 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.4
Ccdc60Q8C4J0 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc60Q8C4J0 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc60Q8C4J0 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Ccdc60Q8C4J0 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc60Q8C4J0 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc60Q8C4J0 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc60Q8C4J0 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc60Q8C4J0 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC17.57■□□□□ 0.4
Ccdc60Q8C4J0 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc60Q8C4J0 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc60Q8C4J0 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc60Q8C4J0 Gm13859-201ENSMUST00000119936 1423 ntBASIC17.57■□□□□ 0.4
Ccdc60Q8C4J0 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc60Q8C4J0 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc60Q8C4J0 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc60Q8C4J0 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc60Q8C4J0 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc60Q8C4J0 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC17.57■□□□□ 0.4
Ccdc60Q8C4J0 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
Ccdc60Q8C4J0 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc60Q8C4J0 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC17.57■□□□□ 0.4
Ccdc60Q8C4J0 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC17.57■□□□□ 0.4
Ccdc60Q8C4J0 Gm18934-201ENSMUST00000216671 1044 ntBASIC17.57■□□□□ 0.4
Ccdc60Q8C4J0 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc60Q8C4J0 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Ccdc60Q8C4J0 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc60Q8C4J0 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc60Q8C4J0 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Ccdc60Q8C4J0 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC17.57■□□□□ 0.4
Ccdc60Q8C4J0 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Ccdc60Q8C4J0 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC17.57■□□□□ 0.4
Ccdc60Q8C4J0 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms