Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.97□□□□□ -0.17
Sh3rf2Q8BZT2 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sh3rf2Q8BZT2 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sh3rf2Q8BZT2 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Sh3rf2Q8BZT2 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sh3rf2Q8BZT2 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sh3rf2Q8BZT2 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.97□□□□□ -0.17
Sh3rf2Q8BZT2 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.97□□□□□ -0.17
Sh3rf2Q8BZT2 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sh3rf2Q8BZT2 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sh3rf2Q8BZT2 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sh3rf2Q8BZT2 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sh3rf2Q8BZT2 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.97□□□□□ -0.17
Sh3rf2Q8BZT2 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sh3rf2Q8BZT2 Gm5161-201ENSMUST00000075243 853 ntBASIC13.97□□□□□ -0.17
Sh3rf2Q8BZT2 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sh3rf2Q8BZT2 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sh3rf2Q8BZT2 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Sh3rf2Q8BZT2 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
Sh3rf2Q8BZT2 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sh3rf2Q8BZT2 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sh3rf2Q8BZT2 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.97□□□□□ -0.17
Sh3rf2Q8BZT2 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Sh3rf2Q8BZT2 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sh3rf2Q8BZT2 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sh3rf2Q8BZT2 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sh3rf2Q8BZT2 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.96□□□□□ -0.17
Sh3rf2Q8BZT2 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sh3rf2Q8BZT2 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.96□□□□□ -0.17
Sh3rf2Q8BZT2 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sh3rf2Q8BZT2 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sh3rf2Q8BZT2 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sh3rf2Q8BZT2 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.96□□□□□ -0.17
Sh3rf2Q8BZT2 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.96□□□□□ -0.17
Sh3rf2Q8BZT2 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.96□□□□□ -0.17
Sh3rf2Q8BZT2 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sh3rf2Q8BZT2 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.96□□□□□ -0.17
Sh3rf2Q8BZT2 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sh3rf2Q8BZT2 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sh3rf2Q8BZT2 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sh3rf2Q8BZT2 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Sh3rf2Q8BZT2 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Sh3rf2Q8BZT2 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sh3rf2Q8BZT2 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.96□□□□□ -0.17
Sh3rf2Q8BZT2 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sh3rf2Q8BZT2 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sh3rf2Q8BZT2 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sh3rf2Q8BZT2 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.96□□□□□ -0.17
Sh3rf2Q8BZT2 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.96□□□□□ -0.18
Sh3rf2Q8BZT2 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sh3rf2Q8BZT2 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sh3rf2Q8BZT2 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sh3rf2Q8BZT2 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sh3rf2Q8BZT2 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sh3rf2Q8BZT2 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sh3rf2Q8BZT2 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sh3rf2Q8BZT2 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sh3rf2Q8BZT2 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sh3rf2Q8BZT2 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sh3rf2Q8BZT2 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Sh3rf2Q8BZT2 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sh3rf2Q8BZT2 Gm12390-201ENSMUST00000117897 397 ntBASIC13.95□□□□□ -0.18
Sh3rf2Q8BZT2 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.95□□□□□ -0.18
Sh3rf2Q8BZT2 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.95□□□□□ -0.18
Sh3rf2Q8BZT2 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sh3rf2Q8BZT2 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sh3rf2Q8BZT2 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Sh3rf2Q8BZT2 Gm2445-201ENSMUST00000182798 989 ntBASIC13.95□□□□□ -0.18
Sh3rf2Q8BZT2 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sh3rf2Q8BZT2 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sh3rf2Q8BZT2 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sh3rf2Q8BZT2 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sh3rf2Q8BZT2 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.95□□□□□ -0.18
Sh3rf2Q8BZT2 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sh3rf2Q8BZT2 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Sh3rf2Q8BZT2 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sh3rf2Q8BZT2 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sh3rf2Q8BZT2 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Sh3rf2Q8BZT2 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sh3rf2Q8BZT2 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sh3rf2Q8BZT2 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sh3rf2Q8BZT2 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sh3rf2Q8BZT2 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sh3rf2Q8BZT2 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Sh3rf2Q8BZT2 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh3rf2Q8BZT2 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sh3rf2Q8BZT2 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh3rf2Q8BZT2 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Sh3rf2Q8BZT2 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh3rf2Q8BZT2 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh3rf2Q8BZT2 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh3rf2Q8BZT2 Gm11814-201ENSMUST00000119515 929 ntBASIC13.94□□□□□ -0.18
Sh3rf2Q8BZT2 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.94□□□□□ -0.18
Sh3rf2Q8BZT2 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sh3rf2Q8BZT2 Gm8652-201ENSMUST00000181363 964 ntBASIC13.94□□□□□ -0.18
Sh3rf2Q8BZT2 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sh3rf2Q8BZT2 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Sh3rf2Q8BZT2 Gm44397-201ENSMUST00000195950 113 ntBASIC13.94□□□□□ -0.18
Sh3rf2Q8BZT2 Gm42550-201ENSMUST00000201553 960 ntBASIC13.94□□□□□ -0.18
Sh3rf2Q8BZT2 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms