Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd9Q8BYH8 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Chd9Q8BYH8 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Chd9Q8BYH8 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd9Q8BYH8 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Chd9Q8BYH8 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd9Q8BYH8 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd9Q8BYH8 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
Chd9Q8BYH8 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd9Q8BYH8 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
Chd9Q8BYH8 Rmrp-201ENSMUST00000157463 271 ntBASIC10.74□□□□□ -0.69
Chd9Q8BYH8 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC10.74□□□□□ -0.69
Chd9Q8BYH8 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC10.74□□□□□ -0.69
Chd9Q8BYH8 Gm38223-201ENSMUST00000194484 695 ntBASIC10.74□□□□□ -0.69
Chd9Q8BYH8 Gm43778-201ENSMUST00000199438 199 ntBASIC10.74□□□□□ -0.69
Chd9Q8BYH8 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC10.74□□□□□ -0.69
Chd9Q8BYH8 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Chd9Q8BYH8 AL732506.1-201ENSMUST00000226420 281 ntBASIC10.74□□□□□ -0.69
Chd9Q8BYH8 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Chd9Q8BYH8 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd9Q8BYH8 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Chd9Q8BYH8 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd9Q8BYH8 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd9Q8BYH8 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC10.74□□□□□ -0.69
Chd9Q8BYH8 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Chd9Q8BYH8 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd9Q8BYH8 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd9Q8BYH8 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd9Q8BYH8 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd9Q8BYH8 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd9Q8BYH8 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd9Q8BYH8 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Chd9Q8BYH8 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd9Q8BYH8 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd9Q8BYH8 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd9Q8BYH8 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Chd9Q8BYH8 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd9Q8BYH8 Gm15371-201ENSMUST00000117057 784 ntBASIC10.73□□□□□ -0.69
Chd9Q8BYH8 Gm6222-202ENSMUST00000182143 629 ntBASIC10.73□□□□□ -0.69
Chd9Q8BYH8 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd9Q8BYH8 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd9Q8BYH8 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd9Q8BYH8 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd9Q8BYH8 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd9Q8BYH8 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Chd9Q8BYH8 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd9Q8BYH8 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Chd9Q8BYH8 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd9Q8BYH8 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd9Q8BYH8 Gm13859-201ENSMUST00000119936 1423 ntBASIC10.73□□□□□ -0.69
Chd9Q8BYH8 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd9Q8BYH8 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd9Q8BYH8 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd9Q8BYH8 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Chd9Q8BYH8 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Chd9Q8BYH8 Gm3671-201ENSMUST00000182463 1007 ntBASIC10.73□□□□□ -0.69
Chd9Q8BYH8 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Chd9Q8BYH8 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Chd9Q8BYH8 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd9Q8BYH8 Gm7551-201ENSMUST00000089593 1074 ntBASIC10.73□□□□□ -0.69
Chd9Q8BYH8 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Chd9Q8BYH8 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Chd9Q8BYH8 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd9Q8BYH8 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Chd9Q8BYH8 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC10.73□□□□□ -0.69
Chd9Q8BYH8 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd9Q8BYH8 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Chd9Q8BYH8 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd9Q8BYH8 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd9Q8BYH8 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Chd9Q8BYH8 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd9Q8BYH8 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd9Q8BYH8 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Chd9Q8BYH8 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd9Q8BYH8 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC10.72□□□□□ -0.69
Chd9Q8BYH8 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd9Q8BYH8 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd9Q8BYH8 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC10.72□□□□□ -0.69
Chd9Q8BYH8 Gm13385-201ENSMUST00000121089 220 ntBASIC10.72□□□□□ -0.69
Chd9Q8BYH8 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Chd9Q8BYH8 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC10.72□□□□□ -0.69
Chd9Q8BYH8 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC10.72□□□□□ -0.69
Chd9Q8BYH8 Gm9873-201ENSMUST00000063891 1097 ntBASIC10.72□□□□□ -0.69
Chd9Q8BYH8 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd9Q8BYH8 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd9Q8BYH8 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Chd9Q8BYH8 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC10.72□□□□□ -0.69
Chd9Q8BYH8 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC10.72□□□□□ -0.69
Chd9Q8BYH8 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
Chd9Q8BYH8 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Chd9Q8BYH8 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd9Q8BYH8 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Chd9Q8BYH8 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Chd9Q8BYH8 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Chd9Q8BYH8 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd9Q8BYH8 Spcs1-203ENSMUST00000226374 592 ntBASIC10.72□□□□□ -0.69
Chd9Q8BYH8 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd9Q8BYH8 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd9Q8BYH8 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
Chd9Q8BYH8 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms