Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Gm6335-201ENSMUST00000118081 1194 ntBASIC11.41□□□□□ -0.58
Smg1Q8BKX6 Gm7816-201ENSMUST00000119884 1194 ntBASIC11.41□□□□□ -0.58
Smg1Q8BKX6 Gm15542-201ENSMUST00000121585 1194 ntBASIC11.41□□□□□ -0.58
Smg1Q8BKX6 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Smg1Q8BKX6 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC11.41□□□□□ -0.58
Smg1Q8BKX6 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.41□□□□□ -0.58
Smg1Q8BKX6 AC099645.1-201ENSMUST00000226476 1105 ntBASIC11.41□□□□□ -0.58
Smg1Q8BKX6 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Smg1Q8BKX6 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Smg1Q8BKX6 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smg1Q8BKX6 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC11.41□□□□□ -0.58
Smg1Q8BKX6 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smg1Q8BKX6 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smg1Q8BKX6 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smg1Q8BKX6 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smg1Q8BKX6 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Smg1Q8BKX6 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smg1Q8BKX6 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smg1Q8BKX6 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Smg1Q8BKX6 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.41□□□□□ -0.58
Smg1Q8BKX6 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.41□□□□□ -0.58
Smg1Q8BKX6 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Smg1Q8BKX6 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.41□□□□□ -0.58
Smg1Q8BKX6 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Smg1Q8BKX6 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smg1Q8BKX6 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smg1Q8BKX6 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Smg1Q8BKX6 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Smg1Q8BKX6 Gm9347-201ENSMUST00000211473 1607 ntBASIC11.41□□□□□ -0.58
Smg1Q8BKX6 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Smg1Q8BKX6 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Smg1Q8BKX6 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smg1Q8BKX6 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smg1Q8BKX6 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.4□□□□□ -0.58
Smg1Q8BKX6 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.4□□□□□ -0.58
Smg1Q8BKX6 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC11.4□□□□□ -0.58
Smg1Q8BKX6 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.4□□□□□ -0.58
Smg1Q8BKX6 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smg1Q8BKX6 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smg1Q8BKX6 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Smg1Q8BKX6 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smg1Q8BKX6 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smg1Q8BKX6 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Smg1Q8BKX6 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Smg1Q8BKX6 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Smg1Q8BKX6 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC11.4□□□□□ -0.58
Smg1Q8BKX6 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.58
Smg1Q8BKX6 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Smg1Q8BKX6 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Smg1Q8BKX6 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Smg1Q8BKX6 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smg1Q8BKX6 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Smg1Q8BKX6 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smg1Q8BKX6 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smg1Q8BKX6 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smg1Q8BKX6 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smg1Q8BKX6 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smg1Q8BKX6 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smg1Q8BKX6 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Smg1Q8BKX6 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smg1Q8BKX6 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smg1Q8BKX6 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Smg1Q8BKX6 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.4□□□□□ -0.58
Smg1Q8BKX6 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
Smg1Q8BKX6 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC11.4□□□□□ -0.58
Smg1Q8BKX6 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC11.4□□□□□ -0.58
Smg1Q8BKX6 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smg1Q8BKX6 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Smg1Q8BKX6 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Smg1Q8BKX6 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Smg1Q8BKX6 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smg1Q8BKX6 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.39□□□□□ -0.59
Smg1Q8BKX6 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smg1Q8BKX6 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
Smg1Q8BKX6 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Smg1Q8BKX6 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smg1Q8BKX6 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Smg1Q8BKX6 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.39□□□□□ -0.59
Smg1Q8BKX6 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Smg1Q8BKX6 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smg1Q8BKX6 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.39□□□□□ -0.59
Smg1Q8BKX6 AC125486.1-201ENSMUST00000218701 320 ntBASIC11.39□□□□□ -0.59
Smg1Q8BKX6 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smg1Q8BKX6 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.39□□□□□ -0.59
Smg1Q8BKX6 Gm26315-201ENSMUST00000083890 321 ntBASIC11.39□□□□□ -0.59
Smg1Q8BKX6 Gm24447-201ENSMUST00000083977 338 ntBASIC11.39□□□□□ -0.59
Smg1Q8BKX6 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smg1Q8BKX6 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smg1Q8BKX6 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smg1Q8BKX6 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smg1Q8BKX6 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smg1Q8BKX6 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smg1Q8BKX6 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smg1Q8BKX6 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC11.39□□□□□ -0.59
Smg1Q8BKX6 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smg1Q8BKX6 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smg1Q8BKX6 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smg1Q8BKX6 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smg1Q8BKX6 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.39□□□□□ -0.59
Smg1Q8BKX6 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms