Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Usp6nlQ80XC3 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Usp6nlQ80XC3 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Usp6nlQ80XC3 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Usp6nlQ80XC3 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Usp6nlQ80XC3 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Usp6nlQ80XC3 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Usp6nlQ80XC3 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Usp6nlQ80XC3 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Usp6nlQ80XC3 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Usp6nlQ80XC3 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Usp6nlQ80XC3 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.19■□□□□ 0.02
Usp6nlQ80XC3 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Usp6nlQ80XC3 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC15.19■□□□□ 0.02
Usp6nlQ80XC3 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Usp6nlQ80XC3 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Usp6nlQ80XC3 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC15.19■□□□□ 0.02
Usp6nlQ80XC3 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Usp6nlQ80XC3 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Usp6nlQ80XC3 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC15.19■□□□□ 0.02
Usp6nlQ80XC3 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Usp6nlQ80XC3 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC15.19■□□□□ 0.02
Usp6nlQ80XC3 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Usp6nlQ80XC3 Gm29705-201ENSMUST00000212598 474 ntBASIC15.19■□□□□ 0.02
Usp6nlQ80XC3 Gm9257-201ENSMUST00000221254 232 ntBASIC15.19■□□□□ 0.02
Usp6nlQ80XC3 CU024892.2-201ENSMUST00000224608 832 ntBASIC15.19■□□□□ 0.02
Usp6nlQ80XC3 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Usp6nlQ80XC3 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Usp6nlQ80XC3 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Usp6nlQ80XC3 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Usp6nlQ80XC3 Gm18222-201ENSMUST00000202416 1387 ntBASIC15.19■□□□□ 0.02
Usp6nlQ80XC3 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Usp6nlQ80XC3 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Usp6nlQ80XC3 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Usp6nlQ80XC3 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Usp6nlQ80XC3 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Usp6nlQ80XC3 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Usp6nlQ80XC3 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Usp6nlQ80XC3 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Usp6nlQ80XC3 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Usp6nlQ80XC3 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC15.18■□□□□ 0.02
Usp6nlQ80XC3 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Usp6nlQ80XC3 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Usp6nlQ80XC3 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Usp6nlQ80XC3 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Usp6nlQ80XC3 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC15.18■□□□□ 0.02
Usp6nlQ80XC3 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC15.18■□□□□ 0.02
Usp6nlQ80XC3 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Usp6nlQ80XC3 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC15.18■□□□□ 0.02
Usp6nlQ80XC3 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Usp6nlQ80XC3 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC15.18■□□□□ 0.02
Usp6nlQ80XC3 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC15.18■□□□□ 0.02
Usp6nlQ80XC3 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Usp6nlQ80XC3 Gm19309-201ENSMUST00000218295 205 ntBASIC15.18■□□□□ 0.02
Usp6nlQ80XC3 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Usp6nlQ80XC3 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Usp6nlQ80XC3 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Usp6nlQ80XC3 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Usp6nlQ80XC3 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Usp6nlQ80XC3 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Usp6nlQ80XC3 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Usp6nlQ80XC3 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Usp6nlQ80XC3 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC15.17■□□□□ 0.02
Usp6nlQ80XC3 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Usp6nlQ80XC3 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
Usp6nlQ80XC3 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Usp6nlQ80XC3 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Usp6nlQ80XC3 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Usp6nlQ80XC3 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Usp6nlQ80XC3 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Usp6nlQ80XC3 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Usp6nlQ80XC3 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Usp6nlQ80XC3 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Usp6nlQ80XC3 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.17■□□□□ 0.02
Usp6nlQ80XC3 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Usp6nlQ80XC3 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Usp6nlQ80XC3 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Usp6nlQ80XC3 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Usp6nlQ80XC3 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC15.17■□□□□ 0.02
Usp6nlQ80XC3 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Usp6nlQ80XC3 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Usp6nlQ80XC3 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC15.17■□□□□ 0.02
Usp6nlQ80XC3 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC15.17■□□□□ 0.02
Usp6nlQ80XC3 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Usp6nlQ80XC3 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC15.17■□□□□ 0.02
Usp6nlQ80XC3 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Usp6nlQ80XC3 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC15.17■□□□□ 0.02
Usp6nlQ80XC3 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Usp6nlQ80XC3 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Usp6nlQ80XC3 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Usp6nlQ80XC3 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Usp6nlQ80XC3 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Usp6nlQ80XC3 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Usp6nlQ80XC3 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Usp6nlQ80XC3 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.17■□□□□ 0.02
Usp6nlQ80XC3 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Usp6nlQ80XC3 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Usp6nlQ80XC3 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Usp6nlQ80XC3 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Usp6nlQ80XC3 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms