Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.77□□□□□ -0.37
Pif1Q80SX8 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.77□□□□□ -0.37
Pif1Q80SX8 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pif1Q80SX8 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.77□□□□□ -0.37
Pif1Q80SX8 Gm43094-201ENSMUST00000196549 921 ntBASIC12.77□□□□□ -0.37
Pif1Q80SX8 Gm45841-201ENSMUST00000207700 164 ntBASIC12.77□□□□□ -0.37
Pif1Q80SX8 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pif1Q80SX8 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.77□□□□□ -0.37
Pif1Q80SX8 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Pif1Q80SX8 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Pif1Q80SX8 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pif1Q80SX8 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pif1Q80SX8 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pif1Q80SX8 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pif1Q80SX8 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pif1Q80SX8 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pif1Q80SX8 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pif1Q80SX8 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pif1Q80SX8 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pif1Q80SX8 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pif1Q80SX8 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
Pif1Q80SX8 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pif1Q80SX8 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pif1Q80SX8 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Pif1Q80SX8 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pif1Q80SX8 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pif1Q80SX8 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pif1Q80SX8 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pif1Q80SX8 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pif1Q80SX8 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pif1Q80SX8 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.76□□□□□ -0.37
Pif1Q80SX8 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pif1Q80SX8 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Pif1Q80SX8 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pif1Q80SX8 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pif1Q80SX8 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pif1Q80SX8 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Pif1Q80SX8 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pif1Q80SX8 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pif1Q80SX8 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pif1Q80SX8 Gm25927-201ENSMUST00000175058 117 ntBASIC12.76□□□□□ -0.37
Pif1Q80SX8 Gm27486-201ENSMUST00000184923 80 ntBASIC12.76□□□□□ -0.37
Pif1Q80SX8 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Pif1Q80SX8 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pif1Q80SX8 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Pif1Q80SX8 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pif1Q80SX8 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pif1Q80SX8 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pif1Q80SX8 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pif1Q80SX8 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pif1Q80SX8 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pif1Q80SX8 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pif1Q80SX8 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.76□□□□□ -0.37
Pif1Q80SX8 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Pif1Q80SX8 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.76□□□□□ -0.37
Pif1Q80SX8 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pif1Q80SX8 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Pif1Q80SX8 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pif1Q80SX8 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pif1Q80SX8 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pif1Q80SX8 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pif1Q80SX8 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pif1Q80SX8 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pif1Q80SX8 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Pif1Q80SX8 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Pif1Q80SX8 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pif1Q80SX8 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pif1Q80SX8 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pif1Q80SX8 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pif1Q80SX8 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pif1Q80SX8 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pif1Q80SX8 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Pif1Q80SX8 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Pif1Q80SX8 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pif1Q80SX8 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pif1Q80SX8 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.75□□□□□ -0.37
Pif1Q80SX8 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.75□□□□□ -0.37
Pif1Q80SX8 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pif1Q80SX8 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pif1Q80SX8 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.75□□□□□ -0.37
Pif1Q80SX8 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pif1Q80SX8 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pif1Q80SX8 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pif1Q80SX8 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pif1Q80SX8 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.75□□□□□ -0.37
Pif1Q80SX8 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.75□□□□□ -0.37
Pif1Q80SX8 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pif1Q80SX8 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pif1Q80SX8 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pif1Q80SX8 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pif1Q80SX8 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pif1Q80SX8 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pif1Q80SX8 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pif1Q80SX8 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pif1Q80SX8 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Pif1Q80SX8 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Pif1Q80SX8 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pif1Q80SX8 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Pif1Q80SX8 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.75□□□□□ -0.37
Pif1Q80SX8 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms