Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cspg5Q71M36 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cspg5Q71M36 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cspg5Q71M36 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cspg5Q71M36 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cspg5Q71M36 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cspg5Q71M36 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cspg5Q71M36 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cspg5Q71M36 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cspg5Q71M36 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cspg5Q71M36 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Cspg5Q71M36 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cspg5Q71M36 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cspg5Q71M36 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cspg5Q71M36 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cspg5Q71M36 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Cspg5Q71M36 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cspg5Q71M36 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cspg5Q71M36 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cspg5Q71M36 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.33□□□□□ -0.12
Cspg5Q71M36 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cspg5Q71M36 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cspg5Q71M36 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cspg5Q71M36 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Cspg5Q71M36 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cspg5Q71M36 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Cspg5Q71M36 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC14.33□□□□□ -0.12
Cspg5Q71M36 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cspg5Q71M36 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.33□□□□□ -0.12
Cspg5Q71M36 AA619741-201ENSMUST00000195095 646 ntBASIC14.33□□□□□ -0.12
Cspg5Q71M36 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.33□□□□□ -0.12
Cspg5Q71M36 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cspg5Q71M36 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.33□□□□□ -0.12
Cspg5Q71M36 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cspg5Q71M36 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Cspg5Q71M36 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cspg5Q71M36 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Cspg5Q71M36 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cspg5Q71M36 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cspg5Q71M36 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cspg5Q71M36 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cspg5Q71M36 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cspg5Q71M36 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cspg5Q71M36 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cspg5Q71M36 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cspg5Q71M36 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cspg5Q71M36 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cspg5Q71M36 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cspg5Q71M36 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cspg5Q71M36 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cspg5Q71M36 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cspg5Q71M36 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cspg5Q71M36 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cspg5Q71M36 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cspg5Q71M36 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cspg5Q71M36 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Cspg5Q71M36 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cspg5Q71M36 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cspg5Q71M36 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cspg5Q71M36 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.32□□□□□ -0.12
Cspg5Q71M36 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.32□□□□□ -0.12
Cspg5Q71M36 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.32□□□□□ -0.12
Cspg5Q71M36 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.32□□□□□ -0.12
Cspg5Q71M36 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC14.32□□□□□ -0.12
Cspg5Q71M36 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14.32□□□□□ -0.12
Cspg5Q71M36 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.32□□□□□ -0.12
Cspg5Q71M36 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.32□□□□□ -0.12
Cspg5Q71M36 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cspg5Q71M36 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cspg5Q71M36 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.32□□□□□ -0.12
Cspg5Q71M36 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Cspg5Q71M36 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cspg5Q71M36 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cspg5Q71M36 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cspg5Q71M36 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cspg5Q71M36 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cspg5Q71M36 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cspg5Q71M36 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cspg5Q71M36 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cspg5Q71M36 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Cspg5Q71M36 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.31□□□□□ -0.12
Cspg5Q71M36 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cspg5Q71M36 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cspg5Q71M36 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cspg5Q71M36 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cspg5Q71M36 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cspg5Q71M36 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.31□□□□□ -0.12
Cspg5Q71M36 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.31□□□□□ -0.12
Cspg5Q71M36 Mir1982-201ENSMUST00000157368 74 ntBASIC14.31□□□□□ -0.12
Cspg5Q71M36 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Cspg5Q71M36 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cspg5Q71M36 Gm27701-201ENSMUST00000184498 110 ntBASIC14.31□□□□□ -0.12
Cspg5Q71M36 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.31□□□□□ -0.12
Cspg5Q71M36 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.31□□□□□ -0.12
Cspg5Q71M36 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Cspg5Q71M36 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.31□□□□□ -0.12
Cspg5Q71M36 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cspg5Q71M36 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cspg5Q71M36 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cspg5Q71M36 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms