Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nudcd1Q6PIP5 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nudcd1Q6PIP5 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nudcd1Q6PIP5 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nudcd1Q6PIP5 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nudcd1Q6PIP5 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nudcd1Q6PIP5 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nudcd1Q6PIP5 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nudcd1Q6PIP5 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nudcd1Q6PIP5 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nudcd1Q6PIP5 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nudcd1Q6PIP5 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nudcd1Q6PIP5 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nudcd1Q6PIP5 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.92□□□□□ -0.18
Nudcd1Q6PIP5 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nudcd1Q6PIP5 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nudcd1Q6PIP5 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nudcd1Q6PIP5 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nudcd1Q6PIP5 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nudcd1Q6PIP5 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nudcd1Q6PIP5 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nudcd1Q6PIP5 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Nudcd1Q6PIP5 Gm15678-201ENSMUST00000117573 960 ntBASIC13.92□□□□□ -0.18
Nudcd1Q6PIP5 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Nudcd1Q6PIP5 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nudcd1Q6PIP5 Gm29741-201ENSMUST00000192667 421 ntBASIC13.92□□□□□ -0.18
Nudcd1Q6PIP5 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.92□□□□□ -0.18
Nudcd1Q6PIP5 Gm18307-201ENSMUST00000206864 949 ntBASIC13.92□□□□□ -0.18
Nudcd1Q6PIP5 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.92□□□□□ -0.18
Nudcd1Q6PIP5 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nudcd1Q6PIP5 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nudcd1Q6PIP5 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nudcd1Q6PIP5 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nudcd1Q6PIP5 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nudcd1Q6PIP5 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.92□□□□□ -0.18
Nudcd1Q6PIP5 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nudcd1Q6PIP5 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nudcd1Q6PIP5 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nudcd1Q6PIP5 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nudcd1Q6PIP5 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Nudcd1Q6PIP5 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Nudcd1Q6PIP5 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nudcd1Q6PIP5 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Nudcd1Q6PIP5 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nudcd1Q6PIP5 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nudcd1Q6PIP5 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nudcd1Q6PIP5 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nudcd1Q6PIP5 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Nudcd1Q6PIP5 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nudcd1Q6PIP5 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Nudcd1Q6PIP5 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nudcd1Q6PIP5 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nudcd1Q6PIP5 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.91□□□□□ -0.18
Nudcd1Q6PIP5 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nudcd1Q6PIP5 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Nudcd1Q6PIP5 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.91□□□□□ -0.18
Nudcd1Q6PIP5 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nudcd1Q6PIP5 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nudcd1Q6PIP5 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nudcd1Q6PIP5 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nudcd1Q6PIP5 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nudcd1Q6PIP5 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nudcd1Q6PIP5 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nudcd1Q6PIP5 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nudcd1Q6PIP5 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nudcd1Q6PIP5 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.91□□□□□ -0.18
Nudcd1Q6PIP5 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.91□□□□□ -0.18
Nudcd1Q6PIP5 Gm8584-201ENSMUST00000171982 758 ntBASIC13.91□□□□□ -0.18
Nudcd1Q6PIP5 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.91□□□□□ -0.18
Nudcd1Q6PIP5 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.91□□□□□ -0.18
Nudcd1Q6PIP5 Gm28911-201ENSMUST00000188837 117 ntBASIC13.91□□□□□ -0.18
Nudcd1Q6PIP5 Gm19078-201ENSMUST00000206311 727 ntBASIC13.91□□□□□ -0.18
Nudcd1Q6PIP5 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nudcd1Q6PIP5 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.91□□□□□ -0.18
Nudcd1Q6PIP5 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nudcd1Q6PIP5 Mir497b-201ENSMUST00000093601 125 ntBASIC13.91□□□□□ -0.18
Nudcd1Q6PIP5 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nudcd1Q6PIP5 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nudcd1Q6PIP5 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nudcd1Q6PIP5 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nudcd1Q6PIP5 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nudcd1Q6PIP5 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nudcd1Q6PIP5 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nudcd1Q6PIP5 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nudcd1Q6PIP5 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nudcd1Q6PIP5 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.91□□□□□ -0.18
Nudcd1Q6PIP5 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nudcd1Q6PIP5 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.91□□□□□ -0.18
Nudcd1Q6PIP5 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nudcd1Q6PIP5 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nudcd1Q6PIP5 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nudcd1Q6PIP5 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nudcd1Q6PIP5 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nudcd1Q6PIP5 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nudcd1Q6PIP5 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nudcd1Q6PIP5 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Nudcd1Q6PIP5 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nudcd1Q6PIP5 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nudcd1Q6PIP5 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nudcd1Q6PIP5 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms