Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc85bQ6PDY0 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ccdc85bQ6PDY0 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc85bQ6PDY0 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc85bQ6PDY0 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc85bQ6PDY0 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.34□□□□□ -0.11
Ccdc85bQ6PDY0 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc85bQ6PDY0 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc85bQ6PDY0 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc85bQ6PDY0 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc85bQ6PDY0 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc85bQ6PDY0 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC14.34□□□□□ -0.11
Ccdc85bQ6PDY0 Gm12203-201ENSMUST00000118235 598 ntBASIC14.34□□□□□ -0.11
Ccdc85bQ6PDY0 Gm12209-201ENSMUST00000120089 596 ntBASIC14.34□□□□□ -0.11
Ccdc85bQ6PDY0 Gm12882-201ENSMUST00000121696 517 ntBASIC14.34□□□□□ -0.11
Ccdc85bQ6PDY0 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc85bQ6PDY0 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC14.34□□□□□ -0.11
Ccdc85bQ6PDY0 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc85bQ6PDY0 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc85bQ6PDY0 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14.34□□□□□ -0.11
Ccdc85bQ6PDY0 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc85bQ6PDY0 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc85bQ6PDY0 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc85bQ6PDY0 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC14.34□□□□□ -0.11
Ccdc85bQ6PDY0 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc85bQ6PDY0 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc85bQ6PDY0 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc85bQ6PDY0 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.34□□□□□ -0.11
Ccdc85bQ6PDY0 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Ccdc85bQ6PDY0 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.34□□□□□ -0.11
Ccdc85bQ6PDY0 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.34□□□□□ -0.11
Ccdc85bQ6PDY0 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc85bQ6PDY0 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc85bQ6PDY0 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc85bQ6PDY0 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc85bQ6PDY0 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc85bQ6PDY0 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc85bQ6PDY0 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc85bQ6PDY0 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc85bQ6PDY0 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc85bQ6PDY0 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.33□□□□□ -0.11
Ccdc85bQ6PDY0 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc85bQ6PDY0 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc85bQ6PDY0 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc85bQ6PDY0 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc85bQ6PDY0 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc85bQ6PDY0 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc85bQ6PDY0 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ccdc85bQ6PDY0 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc85bQ6PDY0 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc85bQ6PDY0 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc85bQ6PDY0 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc85bQ6PDY0 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.33□□□□□ -0.12
Ccdc85bQ6PDY0 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc85bQ6PDY0 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc85bQ6PDY0 Gm24255-201ENSMUST00000104481 128 ntBASIC14.33□□□□□ -0.12
Ccdc85bQ6PDY0 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC14.33□□□□□ -0.12
Ccdc85bQ6PDY0 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC14.33□□□□□ -0.12
Ccdc85bQ6PDY0 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Ccdc85bQ6PDY0 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.33□□□□□ -0.12
Ccdc85bQ6PDY0 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc85bQ6PDY0 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.33□□□□□ -0.12
Ccdc85bQ6PDY0 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc85bQ6PDY0 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Ccdc85bQ6PDY0 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc85bQ6PDY0 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc85bQ6PDY0 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.33□□□□□ -0.12
Ccdc85bQ6PDY0 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Ccdc85bQ6PDY0 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc85bQ6PDY0 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc85bQ6PDY0 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc85bQ6PDY0 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc85bQ6PDY0 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc85bQ6PDY0 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ccdc85bQ6PDY0 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc85bQ6PDY0 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC14.32□□□□□ -0.12
Ccdc85bQ6PDY0 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Ccdc85bQ6PDY0 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.32□□□□□ -0.12
Ccdc85bQ6PDY0 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc85bQ6PDY0 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc85bQ6PDY0 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc85bQ6PDY0 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc85bQ6PDY0 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ccdc85bQ6PDY0 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ccdc85bQ6PDY0 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ccdc85bQ6PDY0 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ccdc85bQ6PDY0 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ccdc85bQ6PDY0 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ccdc85bQ6PDY0 Gm22323-201ENSMUST00000103832 109 ntBASIC14.32□□□□□ -0.12
Ccdc85bQ6PDY0 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC14.32□□□□□ -0.12
Ccdc85bQ6PDY0 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc85bQ6PDY0 Gm15370-201ENSMUST00000117158 253 ntBASIC14.32□□□□□ -0.12
Ccdc85bQ6PDY0 Gm14263-201ENSMUST00000117955 746 ntBASIC14.32□□□□□ -0.12
Ccdc85bQ6PDY0 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc85bQ6PDY0 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC14.32□□□□□ -0.12
Ccdc85bQ6PDY0 Gm43830-201ENSMUST00000198760 1067 ntBASIC14.32□□□□□ -0.12
Ccdc85bQ6PDY0 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc85bQ6PDY0 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Ccdc85bQ6PDY0 Gm18473-201ENSMUST00000220543 868 ntBASIC14.32□□□□□ -0.12
Ccdc85bQ6PDY0 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms