Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd3Q6P9Z1 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Smarcd3Q6P9Z1 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd3Q6P9Z1 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Smarcd3Q6P9Z1 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.67□□□□□ -0.38
Smarcd3Q6P9Z1 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd3Q6P9Z1 Gm14494-201ENSMUST00000118786 435 ntBASIC12.67□□□□□ -0.38
Smarcd3Q6P9Z1 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd3Q6P9Z1 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd3Q6P9Z1 AA619741-201ENSMUST00000195095 646 ntBASIC12.67□□□□□ -0.38
Smarcd3Q6P9Z1 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd3Q6P9Z1 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd3Q6P9Z1 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd3Q6P9Z1 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd3Q6P9Z1 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd3Q6P9Z1 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd3Q6P9Z1 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd3Q6P9Z1 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd3Q6P9Z1 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd3Q6P9Z1 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd3Q6P9Z1 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd3Q6P9Z1 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd3Q6P9Z1 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd3Q6P9Z1 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Smarcd3Q6P9Z1 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd3Q6P9Z1 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.66□□□□□ -0.38
Smarcd3Q6P9Z1 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd3Q6P9Z1 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Smarcd3Q6P9Z1 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd3Q6P9Z1 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd3Q6P9Z1 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Smarcd3Q6P9Z1 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd3Q6P9Z1 Gm6222-201ENSMUST00000120787 396 ntBASIC12.66□□□□□ -0.38
Smarcd3Q6P9Z1 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.66□□□□□ -0.38
Smarcd3Q6P9Z1 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd3Q6P9Z1 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd3Q6P9Z1 AA543401-201ENSMUST00000164248 1269 ntBASIC12.66□□□□□ -0.38
Smarcd3Q6P9Z1 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.66□□□□□ -0.38
Smarcd3Q6P9Z1 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd3Q6P9Z1 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.66□□□□□ -0.38
Smarcd3Q6P9Z1 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.66□□□□□ -0.38
Smarcd3Q6P9Z1 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd3Q6P9Z1 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd3Q6P9Z1 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd3Q6P9Z1 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Smarcd3Q6P9Z1 Gm10175-201ENSMUST00000086013 645 ntBASIC12.66□□□□□ -0.38
Smarcd3Q6P9Z1 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Smarcd3Q6P9Z1 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd3Q6P9Z1 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Smarcd3Q6P9Z1 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd3Q6P9Z1 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.66□□□□□ -0.38
Smarcd3Q6P9Z1 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.66□□□□□ -0.38
Smarcd3Q6P9Z1 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd3Q6P9Z1 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd3Q6P9Z1 BC001981-202ENSMUST00000191393 1545 ntBASIC12.66□□□□□ -0.38
Smarcd3Q6P9Z1 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd3Q6P9Z1 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Smarcd3Q6P9Z1 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd3Q6P9Z1 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Smarcd3Q6P9Z1 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd3Q6P9Z1 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Smarcd3Q6P9Z1 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd3Q6P9Z1 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.66□□□□□ -0.38
Smarcd3Q6P9Z1 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd3Q6P9Z1 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcd3Q6P9Z1 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcd3Q6P9Z1 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcd3Q6P9Z1 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcd3Q6P9Z1 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcd3Q6P9Z1 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcd3Q6P9Z1 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcd3Q6P9Z1 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Smarcd3Q6P9Z1 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcd3Q6P9Z1 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcd3Q6P9Z1 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcd3Q6P9Z1 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcd3Q6P9Z1 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcd3Q6P9Z1 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcd3Q6P9Z1 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcd3Q6P9Z1 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcd3Q6P9Z1 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Smarcd3Q6P9Z1 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Smarcd3Q6P9Z1 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.65□□□□□ -0.38
Smarcd3Q6P9Z1 Gm13823-201ENSMUST00000119930 345 ntBASIC12.65□□□□□ -0.38
Smarcd3Q6P9Z1 Gm11745-201ENSMUST00000121669 448 ntBASIC12.65□□□□□ -0.38
Smarcd3Q6P9Z1 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcd3Q6P9Z1 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.65□□□□□ -0.38
Smarcd3Q6P9Z1 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcd3Q6P9Z1 Gm2445-201ENSMUST00000182798 989 ntBASIC12.65□□□□□ -0.38
Smarcd3Q6P9Z1 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.65□□□□□ -0.38
Smarcd3Q6P9Z1 AC132104.2-201ENSMUST00000215011 266 ntBASIC12.65□□□□□ -0.38
Smarcd3Q6P9Z1 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.65□□□□□ -0.38
Smarcd3Q6P9Z1 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcd3Q6P9Z1 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcd3Q6P9Z1 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcd3Q6P9Z1 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcd3Q6P9Z1 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcd3Q6P9Z1 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcd3Q6P9Z1 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcd3Q6P9Z1 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms