Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Scube3Q66PY1 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scube3Q66PY1 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scube3Q66PY1 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Scube3Q66PY1 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scube3Q66PY1 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC14.54□□□□□ -0.08
Scube3Q66PY1 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scube3Q66PY1 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
Scube3Q66PY1 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC14.54□□□□□ -0.08
Scube3Q66PY1 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC14.54□□□□□ -0.08
Scube3Q66PY1 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.54□□□□□ -0.08
Scube3Q66PY1 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Scube3Q66PY1 Gm24420-201ENSMUST00000176676 59 ntBASIC14.54□□□□□ -0.08
Scube3Q66PY1 Gm28877-201ENSMUST00000191349 604 ntBASIC14.54□□□□□ -0.08
Scube3Q66PY1 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Scube3Q66PY1 Gm43275-201ENSMUST00000202053 1020 ntBASIC14.54□□□□□ -0.08
Scube3Q66PY1 Gm18905-201ENSMUST00000205454 928 ntBASIC14.54□□□□□ -0.08
Scube3Q66PY1 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.54□□□□□ -0.08
Scube3Q66PY1 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Scube3Q66PY1 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC14.54□□□□□ -0.08
Scube3Q66PY1 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Scube3Q66PY1 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC14.54□□□□□ -0.08
Scube3Q66PY1 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scube3Q66PY1 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scube3Q66PY1 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Scube3Q66PY1 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scube3Q66PY1 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scube3Q66PY1 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scube3Q66PY1 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scube3Q66PY1 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Scube3Q66PY1 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scube3Q66PY1 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scube3Q66PY1 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Scube3Q66PY1 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scube3Q66PY1 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scube3Q66PY1 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scube3Q66PY1 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scube3Q66PY1 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Scube3Q66PY1 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scube3Q66PY1 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scube3Q66PY1 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.53□□□□□ -0.08
Scube3Q66PY1 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scube3Q66PY1 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scube3Q66PY1 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scube3Q66PY1 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Scube3Q66PY1 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scube3Q66PY1 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.53□□□□□ -0.08
Scube3Q66PY1 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scube3Q66PY1 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scube3Q66PY1 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scube3Q66PY1 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scube3Q66PY1 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scube3Q66PY1 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scube3Q66PY1 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Scube3Q66PY1 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scube3Q66PY1 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.53□□□□□ -0.08
Scube3Q66PY1 Gm13899-201ENSMUST00000121519 1255 ntBASIC14.53□□□□□ -0.08
Scube3Q66PY1 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.53□□□□□ -0.08
Scube3Q66PY1 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC14.53□□□□□ -0.08
Scube3Q66PY1 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Scube3Q66PY1 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scube3Q66PY1 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.53□□□□□ -0.08
Scube3Q66PY1 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC14.53□□□□□ -0.08
Scube3Q66PY1 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scube3Q66PY1 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.53□□□□□ -0.08
Scube3Q66PY1 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.53□□□□□ -0.08
Scube3Q66PY1 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Scube3Q66PY1 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scube3Q66PY1 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scube3Q66PY1 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Scube3Q66PY1 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scube3Q66PY1 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Scube3Q66PY1 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Scube3Q66PY1 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Scube3Q66PY1 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Scube3Q66PY1 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.53□□□□□ -0.08
Scube3Q66PY1 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scube3Q66PY1 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.53□□□□□ -0.08
Scube3Q66PY1 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scube3Q66PY1 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Scube3Q66PY1 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scube3Q66PY1 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scube3Q66PY1 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scube3Q66PY1 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scube3Q66PY1 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scube3Q66PY1 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scube3Q66PY1 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scube3Q66PY1 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scube3Q66PY1 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scube3Q66PY1 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scube3Q66PY1 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.52□□□□□ -0.08
Scube3Q66PY1 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scube3Q66PY1 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scube3Q66PY1 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.52□□□□□ -0.09
Scube3Q66PY1 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
Scube3Q66PY1 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scube3Q66PY1 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.52□□□□□ -0.09
Scube3Q66PY1 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Scube3Q66PY1 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Scube3Q66PY1 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms