Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Foxc1Q61572 Ackr1-202ENSMUST00000194046 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Foxc1Q61572 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
Foxc1Q61572 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC10.29□□□□□ -0.76
Foxc1Q61572 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Foxc1Q61572 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC10.29□□□□□ -0.76
Foxc1Q61572 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Foxc1Q61572 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Foxc1Q61572 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Foxc1Q61572 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Foxc1Q61572 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC10.29□□□□□ -0.76
Foxc1Q61572 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Foxc1Q61572 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Foxc1Q61572 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC10.29□□□□□ -0.76
Foxc1Q61572 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Foxc1Q61572 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Foxc1Q61572 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
Foxc1Q61572 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Foxc1Q61572 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Foxc1Q61572 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC10.29□□□□□ -0.76
Foxc1Q61572 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Foxc1Q61572 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC10.29□□□□□ -0.76
Foxc1Q61572 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Foxc1Q61572 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Foxc1Q61572 Gm43364-201ENSMUST00000196046 3274 ntBASIC10.29□□□□□ -0.76
Foxc1Q61572 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Foxc1Q61572 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Foxc1Q61572 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC10.28□□□□□ -0.76
Foxc1Q61572 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Foxc1Q61572 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Foxc1Q61572 Gm13571-201ENSMUST00000124654 1381 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Foxc1Q61572 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC10.28□□□□□ -0.76
Foxc1Q61572 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Foxc1Q61572 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC10.28□□□□□ -0.76
Foxc1Q61572 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Foxc1Q61572 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Foxc1Q61572 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Foxc1Q61572 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Foxc1Q61572 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Foxc1Q61572 Gm7336-201ENSMUST00000107041 1232 ntBASIC10.28□□□□□ -0.76
Foxc1Q61572 Gm5866-201ENSMUST00000177881 973 ntBASIC10.28□□□□□ -0.76
Foxc1Q61572 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Foxc1Q61572 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Foxc1Q61572 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Foxc1Q61572 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Foxc1Q61572 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Foxc1Q61572 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Foxc1Q61572 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Foxc1Q61572 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Foxc1Q61572 Gm9252-201ENSMUST00000172364 1602 ntBASIC10.28□□□□□ -0.76
Foxc1Q61572 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Foxc1Q61572 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Foxc1Q61572 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Foxc1Q61572 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Foxc1Q61572 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Foxc1Q61572 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Foxc1Q61572 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Foxc1Q61572 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Foxc1Q61572 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Foxc1Q61572 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Foxc1Q61572 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Foxc1Q61572 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Foxc1Q61572 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Foxc1Q61572 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Foxc1Q61572 Gm37844-201ENSMUST00000192473 4097 ntBASIC10.28□□□□□ -0.76
Foxc1Q61572 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC10.27□□□□□ -0.76
Foxc1Q61572 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
Foxc1Q61572 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Foxc1Q61572 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Foxc1Q61572 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Foxc1Q61572 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.76
Foxc1Q61572 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Foxc1Q61572 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Foxc1Q61572 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC10.27□□□□□ -0.76
Foxc1Q61572 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Foxc1Q61572 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Foxc1Q61572 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Foxc1Q61572 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Foxc1Q61572 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Foxc1Q61572 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Foxc1Q61572 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Foxc1Q61572 AC136019.1-201ENSMUST00000226503 1412 ntBASIC10.27□□□□□ -0.77
Foxc1Q61572 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Foxc1Q61572 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Foxc1Q61572 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Foxc1Q61572 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Foxc1Q61572 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Foxc1Q61572 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Foxc1Q61572 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Foxc1Q61572 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Foxc1Q61572 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC10.27□□□□□ -0.77
Foxc1Q61572 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC10.27□□□□□ -0.77
Foxc1Q61572 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Foxc1Q61572 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC10.27□□□□□ -0.77
Foxc1Q61572 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC10.27□□□□□ -0.77
Foxc1Q61572 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC10.27□□□□□ -0.77
Foxc1Q61572 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Foxc1Q61572 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Foxc1Q61572 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Foxc1Q61572 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC10.27□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms