Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nr1h4Q60641 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nr1h4Q60641 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nr1h4Q60641 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nr1h4Q60641 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.15□□□□□ -0.3
Nr1h4Q60641 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nr1h4Q60641 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.15□□□□□ -0.3
Nr1h4Q60641 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.15□□□□□ -0.3
Nr1h4Q60641 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Nr1h4Q60641 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nr1h4Q60641 Gm29310-201ENSMUST00000185468 696 ntBASIC13.15□□□□□ -0.3
Nr1h4Q60641 Gm21825-201ENSMUST00000185728 696 ntBASIC13.15□□□□□ -0.3
Nr1h4Q60641 Gm29109-201ENSMUST00000185895 696 ntBASIC13.15□□□□□ -0.3
Nr1h4Q60641 Gm21896-201ENSMUST00000186520 696 ntBASIC13.15□□□□□ -0.3
Nr1h4Q60641 Gm21873-201ENSMUST00000186728 696 ntBASIC13.15□□□□□ -0.3
Nr1h4Q60641 Gm21794-201ENSMUST00000187056 696 ntBASIC13.15□□□□□ -0.3
Nr1h4Q60641 Gm21880-201ENSMUST00000187275 696 ntBASIC13.15□□□□□ -0.3
Nr1h4Q60641 Gm21826-201ENSMUST00000187451 696 ntBASIC13.15□□□□□ -0.3
Nr1h4Q60641 Gm21198-201ENSMUST00000188393 696 ntBASIC13.15□□□□□ -0.3
Nr1h4Q60641 Gm21749-201ENSMUST00000189343 696 ntBASIC13.15□□□□□ -0.3
Nr1h4Q60641 Gm21901-201ENSMUST00000189568 696 ntBASIC13.15□□□□□ -0.3
Nr1h4Q60641 Gm29424-201ENSMUST00000189716 696 ntBASIC13.15□□□□□ -0.3
Nr1h4Q60641 Gm28599-201ENSMUST00000189838 694 ntBASIC13.15□□□□□ -0.3
Nr1h4Q60641 Gm21867-201ENSMUST00000189917 696 ntBASIC13.15□□□□□ -0.3
Nr1h4Q60641 Gm29269-201ENSMUST00000190087 696 ntBASIC13.15□□□□□ -0.3
Nr1h4Q60641 Gm21722-201ENSMUST00000190153 696 ntBASIC13.15□□□□□ -0.3
Nr1h4Q60641 Gm28423-201ENSMUST00000190701 696 ntBASIC13.15□□□□□ -0.3
Nr1h4Q60641 Gm21899-201ENSMUST00000190745 696 ntBASIC13.15□□□□□ -0.3
Nr1h4Q60641 Gm21910-201ENSMUST00000191163 696 ntBASIC13.15□□□□□ -0.3
Nr1h4Q60641 Gm21849-201ENSMUST00000191571 696 ntBASIC13.15□□□□□ -0.3
Nr1h4Q60641 Gm28678-201ENSMUST00000191593 696 ntBASIC13.15□□□□□ -0.3
Nr1h4Q60641 Gm20910-201ENSMUST00000193268 696 ntBASIC13.15□□□□□ -0.3
Nr1h4Q60641 Gm21871-201ENSMUST00000194621 696 ntBASIC13.15□□□□□ -0.3
Nr1h4Q60641 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.15□□□□□ -0.3
Nr1h4Q60641 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.15□□□□□ -0.3
Nr1h4Q60641 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nr1h4Q60641 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nr1h4Q60641 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nr1h4Q60641 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Nr1h4Q60641 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nr1h4Q60641 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nr1h4Q60641 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Nr1h4Q60641 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nr1h4Q60641 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nr1h4Q60641 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.15□□□□□ -0.3
Nr1h4Q60641 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nr1h4Q60641 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nr1h4Q60641 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.15□□□□□ -0.3
Nr1h4Q60641 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nr1h4Q60641 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.15□□□□□ -0.3
Nr1h4Q60641 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nr1h4Q60641 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nr1h4Q60641 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Nr1h4Q60641 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Nr1h4Q60641 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Nr1h4Q60641 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
Nr1h4Q60641 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nr1h4Q60641 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nr1h4Q60641 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC13.14□□□□□ -0.31
Nr1h4Q60641 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Nr1h4Q60641 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nr1h4Q60641 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nr1h4Q60641 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.14□□□□□ -0.31
Nr1h4Q60641 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nr1h4Q60641 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nr1h4Q60641 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nr1h4Q60641 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nr1h4Q60641 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nr1h4Q60641 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nr1h4Q60641 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.14□□□□□ -0.31
Nr1h4Q60641 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nr1h4Q60641 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nr1h4Q60641 Gm11025-201ENSMUST00000140773 466 ntBASIC13.14□□□□□ -0.31
Nr1h4Q60641 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nr1h4Q60641 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.14□□□□□ -0.31
Nr1h4Q60641 AA543401-201ENSMUST00000164248 1269 ntBASIC13.14□□□□□ -0.31
Nr1h4Q60641 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nr1h4Q60641 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.14□□□□□ -0.31
Nr1h4Q60641 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nr1h4Q60641 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.14□□□□□ -0.31
Nr1h4Q60641 Gm20553-201ENSMUST00000204205 844 ntBASIC13.14□□□□□ -0.31
Nr1h4Q60641 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Nr1h4Q60641 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nr1h4Q60641 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.14□□□□□ -0.31
Nr1h4Q60641 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.14□□□□□ -0.31
Nr1h4Q60641 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nr1h4Q60641 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nr1h4Q60641 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nr1h4Q60641 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nr1h4Q60641 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nr1h4Q60641 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.14□□□□□ -0.31
Nr1h4Q60641 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.14□□□□□ -0.31
Nr1h4Q60641 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.14□□□□□ -0.31
Nr1h4Q60641 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nr1h4Q60641 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nr1h4Q60641 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nr1h4Q60641 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Nr1h4Q60641 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Nr1h4Q60641 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nr1h4Q60641 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms