Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scn2bQ56A07 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scn2bQ56A07 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.67□□□□□ -0.22
Scn2bQ56A07 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.67□□□□□ -0.22
Scn2bQ56A07 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.67□□□□□ -0.22
Scn2bQ56A07 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Scn2bQ56A07 Gm25948-201ENSMUST00000175334 112 ntBASIC13.67□□□□□ -0.22
Scn2bQ56A07 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.67□□□□□ -0.22
Scn2bQ56A07 Gm5779-201ENSMUST00000218467 910 ntBASIC13.67□□□□□ -0.22
Scn2bQ56A07 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.67□□□□□ -0.22
Scn2bQ56A07 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.67□□□□□ -0.22
Scn2bQ56A07 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn2bQ56A07 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn2bQ56A07 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Scn2bQ56A07 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn2bQ56A07 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn2bQ56A07 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scn2bQ56A07 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn2bQ56A07 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Scn2bQ56A07 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn2bQ56A07 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Scn2bQ56A07 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scn2bQ56A07 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn2bQ56A07 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.67□□□□□ -0.22
Scn2bQ56A07 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn2bQ56A07 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Scn2bQ56A07 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scn2bQ56A07 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.67□□□□□ -0.22
Scn2bQ56A07 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Scn2bQ56A07 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn2bQ56A07 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn2bQ56A07 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn2bQ56A07 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn2bQ56A07 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scn2bQ56A07 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Scn2bQ56A07 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn2bQ56A07 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn2bQ56A07 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scn2bQ56A07 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn2bQ56A07 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn2bQ56A07 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scn2bQ56A07 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn2bQ56A07 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.66□□□□□ -0.22
Scn2bQ56A07 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.66□□□□□ -0.22
Scn2bQ56A07 Gm13616-201ENSMUST00000120600 222 ntBASIC13.66□□□□□ -0.22
Scn2bQ56A07 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scn2bQ56A07 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scn2bQ56A07 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn2bQ56A07 Gm2445-201ENSMUST00000182798 989 ntBASIC13.66□□□□□ -0.22
Scn2bQ56A07 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.66□□□□□ -0.22
Scn2bQ56A07 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.66□□□□□ -0.22
Scn2bQ56A07 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scn2bQ56A07 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn2bQ56A07 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn2bQ56A07 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn2bQ56A07 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Scn2bQ56A07 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scn2bQ56A07 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn2bQ56A07 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn2bQ56A07 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn2bQ56A07 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scn2bQ56A07 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Scn2bQ56A07 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scn2bQ56A07 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Scn2bQ56A07 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
Scn2bQ56A07 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Scn2bQ56A07 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.65□□□□□ -0.22
Scn2bQ56A07 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn2bQ56A07 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn2bQ56A07 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.65□□□□□ -0.22
Scn2bQ56A07 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Scn2bQ56A07 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn2bQ56A07 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.65□□□□□ -0.22
Scn2bQ56A07 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn2bQ56A07 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn2bQ56A07 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn2bQ56A07 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Scn2bQ56A07 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn2bQ56A07 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn2bQ56A07 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn2bQ56A07 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn2bQ56A07 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Scn2bQ56A07 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn2bQ56A07 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Scn2bQ56A07 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn2bQ56A07 Gm8410-201ENSMUST00000117225 605 ntBASIC13.65□□□□□ -0.22
Scn2bQ56A07 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.65□□□□□ -0.22
Scn2bQ56A07 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.65□□□□□ -0.22
Scn2bQ56A07 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.65□□□□□ -0.22
Scn2bQ56A07 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Scn2bQ56A07 Gm27631-201ENSMUST00000184163 466 ntBASIC13.65□□□□□ -0.22
Scn2bQ56A07 Gm29541-201ENSMUST00000191351 678 ntBASIC13.65□□□□□ -0.22
Scn2bQ56A07 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn2bQ56A07 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Scn2bQ56A07 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Scn2bQ56A07 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Scn2bQ56A07 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn2bQ56A07 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn2bQ56A07 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn2bQ56A07 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms