Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Q3U1D9 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Q3U1D9 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.98□□□□□ -0.49
Q3U1D9 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.98□□□□□ -0.49
Q3U1D9 Gm15429-201ENSMUST00000151268 798 ntBASIC11.98□□□□□ -0.49
Q3U1D9 Gm27892-201ENSMUST00000185017 106 ntBASIC11.98□□□□□ -0.49
Q3U1D9 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.98□□□□□ -0.49
Q3U1D9 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC11.98□□□□□ -0.49
Q3U1D9 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.98□□□□□ -0.49
Q3U1D9 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Q3U1D9 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Q3U1D9 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Q3U1D9 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Q3U1D9 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Q3U1D9 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Q3U1D9 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Q3U1D9 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
Q3U1D9 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC11.98□□□□□ -0.49
Q3U1D9 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Q3U1D9 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Q3U1D9 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Q3U1D9 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Q3U1D9 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Q3U1D9 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Q3U1D9 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Q3U1D9 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC11.98□□□□□ -0.49
Q3U1D9 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Q3U1D9 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Q3U1D9 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Q3U1D9 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Q3U1D9 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Q3U1D9 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Q3U1D9 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Q3U1D9 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC11.97□□□□□ -0.49
Q3U1D9 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC11.97□□□□□ -0.49
Q3U1D9 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Q3U1D9 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Q3U1D9 Sorbs3-204ENSMUST00000227929 2460 ntBASIC11.97□□□□□ -0.49
Q3U1D9 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Q3U1D9 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Q3U1D9 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Q3U1D9 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Q3U1D9 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC11.97□□□□□ -0.49
Q3U1D9 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Q3U1D9 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC11.97□□□□□ -0.49
Q3U1D9 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.97□□□□□ -0.49
Q3U1D9 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.97□□□□□ -0.49
Q3U1D9 Mir1894-201ENSMUST00000122802 81 ntBASIC11.97□□□□□ -0.49
Q3U1D9 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Q3U1D9 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC11.97□□□□□ -0.49
Q3U1D9 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC11.97□□□□□ -0.49
Q3U1D9 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Q3U1D9 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC11.97□□□□□ -0.49
Q3U1D9 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC11.97□□□□□ -0.49
Q3U1D9 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Q3U1D9 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Q3U1D9 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Q3U1D9 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Q3U1D9 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Q3U1D9 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Q3U1D9 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Q3U1D9 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Q3U1D9 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Q3U1D9 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.97□□□□□ -0.49
Q3U1D9 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC11.97□□□□□ -0.49
Q3U1D9 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Q3U1D9 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC11.97□□□□□ -0.49
Q3U1D9 AC168058.1-201ENSMUST00000219521 2282 ntBASIC11.97□□□□□ -0.49
Q3U1D9 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Q3U1D9 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Q3U1D9 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Q3U1D9 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Q3U1D9 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Q3U1D9 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Q3U1D9 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Q3U1D9 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Q3U1D9 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Q3U1D9 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC11.96□□□□□ -0.49
Q3U1D9 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Q3U1D9 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC11.96□□□□□ -0.49
Q3U1D9 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Q3U1D9 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
Q3U1D9 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC11.96□□□□□ -0.49
Q3U1D9 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Q3U1D9 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Q3U1D9 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Q3U1D9 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Q3U1D9 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Q3U1D9 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Q3U1D9 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Q3U1D9 Gm15376-201ENSMUST00000122258 783 ntBASIC11.96□□□□□ -0.49
Q3U1D9 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.96□□□□□ -0.49
Q3U1D9 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Q3U1D9 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Q3U1D9 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Q3U1D9 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Q3U1D9 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC11.96□□□□□ -0.49
Q3U1D9 Gm5035-201ENSMUST00000215581 927 ntBASIC11.96□□□□□ -0.49
Q3U1D9 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Q3U1D9 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms