Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Gm18057-201ENSMUST00000208220 503 ntBASIC11.5□□□□□ -0.57
Tff1Q08423 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC11.5□□□□□ -0.57
Tff1Q08423 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC11.5□□□□□ -0.57
Tff1Q08423 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tff1Q08423 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Tff1Q08423 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tff1Q08423 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tff1Q08423 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tff1Q08423 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Tff1Q08423 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tff1Q08423 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tff1Q08423 Gm10275-201ENSMUST00000092620 635 ntBASIC11.5□□□□□ -0.57
Tff1Q08423 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Tff1Q08423 AC121801.1-201ENSMUST00000225363 1899 ntBASIC11.5□□□□□ -0.57
Tff1Q08423 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tff1Q08423 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tff1Q08423 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tff1Q08423 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tff1Q08423 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tff1Q08423 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Tff1Q08423 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tff1Q08423 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tff1Q08423 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Tff1Q08423 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tff1Q08423 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Tff1Q08423 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tff1Q08423 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Tff1Q08423 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Tff1Q08423 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tff1Q08423 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tff1Q08423 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tff1Q08423 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tff1Q08423 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tff1Q08423 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Tff1Q08423 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Tff1Q08423 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Tff1Q08423 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tff1Q08423 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Tff1Q08423 Gm13823-201ENSMUST00000119930 345 ntBASIC11.49□□□□□ -0.57
Tff1Q08423 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC11.49□□□□□ -0.57
Tff1Q08423 Ighv8-7-201ENSMUST00000194349 297 ntBASIC11.49□□□□□ -0.57
Tff1Q08423 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tff1Q08423 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC11.49□□□□□ -0.57
Tff1Q08423 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tff1Q08423 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tff1Q08423 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Tff1Q08423 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Tff1Q08423 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tff1Q08423 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Tff1Q08423 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tff1Q08423 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
Tff1Q08423 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Tff1Q08423 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tff1Q08423 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tff1Q08423 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tff1Q08423 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Tff1Q08423 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tff1Q08423 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Tff1Q08423 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Tff1Q08423 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tff1Q08423 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tff1Q08423 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tff1Q08423 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tff1Q08423 Gm12020-201ENSMUST00000119030 2042 ntBASIC11.48□□□□□ -0.57
Tff1Q08423 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tff1Q08423 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Tff1Q08423 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Tff1Q08423 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tff1Q08423 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tff1Q08423 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tff1Q08423 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tff1Q08423 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Tff1Q08423 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tff1Q08423 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tff1Q08423 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tff1Q08423 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tff1Q08423 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC11.48□□□□□ -0.57
Tff1Q08423 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC11.48□□□□□ -0.57
Tff1Q08423 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC11.48□□□□□ -0.57
Tff1Q08423 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC11.48□□□□□ -0.57
Tff1Q08423 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tff1Q08423 Gm5779-201ENSMUST00000218467 910 ntBASIC11.48□□□□□ -0.57
Tff1Q08423 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC11.48□□□□□ -0.57
Tff1Q08423 AC131710.1-201ENSMUST00000228336 990 ntBASIC11.48□□□□□ -0.57
Tff1Q08423 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC11.48□□□□□ -0.57
Tff1Q08423 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tff1Q08423 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Tff1Q08423 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Tff1Q08423 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Tff1Q08423 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tff1Q08423 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tff1Q08423 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tff1Q08423 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tff1Q08423 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tff1Q08423 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tff1Q08423 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tff1Q08423 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tff1Q08423 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tff1Q08423 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tff1Q08423 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms