Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC13.64□□□□□ -0.23
Shox2P70390 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Shox2P70390 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.64□□□□□ -0.23
Shox2P70390 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.64□□□□□ -0.23
Shox2P70390 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.64□□□□□ -0.23
Shox2P70390 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC13.64□□□□□ -0.23
Shox2P70390 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Shox2P70390 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.64□□□□□ -0.23
Shox2P70390 Gm10154-201ENSMUST00000084445 354 ntBASIC13.64□□□□□ -0.23
Shox2P70390 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shox2P70390 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Shox2P70390 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
Shox2P70390 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shox2P70390 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shox2P70390 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shox2P70390 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Shox2P70390 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Shox2P70390 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shox2P70390 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shox2P70390 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Shox2P70390 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Shox2P70390 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Shox2P70390 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Shox2P70390 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shox2P70390 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.63□□□□□ -0.23
Shox2P70390 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shox2P70390 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shox2P70390 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.63□□□□□ -0.23
Shox2P70390 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shox2P70390 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shox2P70390 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Shox2P70390 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shox2P70390 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shox2P70390 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Shox2P70390 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC13.63□□□□□ -0.23
Shox2P70390 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.63□□□□□ -0.23
Shox2P70390 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.63□□□□□ -0.23
Shox2P70390 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC13.63□□□□□ -0.23
Shox2P70390 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shox2P70390 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.63□□□□□ -0.23
Shox2P70390 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shox2P70390 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Shox2P70390 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shox2P70390 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
Shox2P70390 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shox2P70390 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Shox2P70390 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Shox2P70390 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shox2P70390 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Shox2P70390 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Shox2P70390 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Shox2P70390 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shox2P70390 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.63□□□□□ -0.23
Shox2P70390 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Shox2P70390 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.62□□□□□ -0.23
Shox2P70390 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.62□□□□□ -0.23
Shox2P70390 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.62□□□□□ -0.23
Shox2P70390 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.62□□□□□ -0.23
Shox2P70390 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Shox2P70390 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Shox2P70390 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.62□□□□□ -0.23
Shox2P70390 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shox2P70390 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shox2P70390 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Shox2P70390 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shox2P70390 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shox2P70390 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.62□□□□□ -0.23
Shox2P70390 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shox2P70390 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Shox2P70390 Gm16198-201ENSMUST00000118766 670 ntBASIC13.62□□□□□ -0.23
Shox2P70390 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC13.62□□□□□ -0.23
Shox2P70390 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Shox2P70390 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.62□□□□□ -0.23
Shox2P70390 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Shox2P70390 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shox2P70390 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shox2P70390 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shox2P70390 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shox2P70390 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Shox2P70390 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shox2P70390 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Shox2P70390 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Shox2P70390 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shox2P70390 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.62□□□□□ -0.23
Shox2P70390 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shox2P70390 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shox2P70390 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shox2P70390 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Shox2P70390 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shox2P70390 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shox2P70390 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shox2P70390 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shox2P70390 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Shox2P70390 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shox2P70390 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Shox2P70390 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shox2P70390 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shox2P70390 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shox2P70390 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shox2P70390 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms