Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Msx3P70354 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Msx3P70354 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Msx3P70354 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.2□□□□□ -0.14
Msx3P70354 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.2□□□□□ -0.14
Msx3P70354 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Msx3P70354 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Msx3P70354 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Msx3P70354 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Msx3P70354 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.2□□□□□ -0.14
Msx3P70354 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.2□□□□□ -0.14
Msx3P70354 Gm12585-201ENSMUST00000117307 290 ntBASIC14.2□□□□□ -0.14
Msx3P70354 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.2□□□□□ -0.14
Msx3P70354 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Msx3P70354 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Msx3P70354 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Msx3P70354 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.2□□□□□ -0.14
Msx3P70354 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Msx3P70354 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Msx3P70354 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Msx3P70354 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Msx3P70354 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Msx3P70354 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Msx3P70354 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Msx3P70354 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.2□□□□□ -0.14
Msx3P70354 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Msx3P70354 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Msx3P70354 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Msx3P70354 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Msx3P70354 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Msx3P70354 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Msx3P70354 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.19□□□□□ -0.14
Msx3P70354 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Msx3P70354 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Msx3P70354 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Msx3P70354 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Msx3P70354 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Msx3P70354 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Msx3P70354 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Msx3P70354 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Msx3P70354 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Msx3P70354 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.19□□□□□ -0.14
Msx3P70354 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.19□□□□□ -0.14
Msx3P70354 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.19□□□□□ -0.14
Msx3P70354 Gm10766-202ENSMUST00000194123 606 ntBASIC14.19□□□□□ -0.14
Msx3P70354 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Msx3P70354 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.19□□□□□ -0.14
Msx3P70354 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Msx3P70354 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Msx3P70354 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Msx3P70354 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Msx3P70354 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Msx3P70354 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Msx3P70354 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Msx3P70354 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Msx3P70354 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Msx3P70354 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Msx3P70354 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Msx3P70354 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Msx3P70354 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Msx3P70354 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Msx3P70354 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Msx3P70354 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Msx3P70354 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Msx3P70354 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Msx3P70354 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Msx3P70354 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.18□□□□□ -0.14
Msx3P70354 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.18□□□□□ -0.14
Msx3P70354 Gm25925-201ENSMUST00000158314 306 ntBASIC14.18□□□□□ -0.14
Msx3P70354 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Msx3P70354 Gm8927-201ENSMUST00000181978 981 ntBASIC14.18□□□□□ -0.14
Msx3P70354 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Msx3P70354 Gm27618-201ENSMUST00000183671 60 ntBASIC14.18□□□□□ -0.14
Msx3P70354 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Msx3P70354 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.18□□□□□ -0.14
Msx3P70354 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Msx3P70354 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Msx3P70354 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.18□□□□□ -0.14
Msx3P70354 Gm3222-201ENSMUST00000071282 990 ntBASIC14.18□□□□□ -0.14
Msx3P70354 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Msx3P70354 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Msx3P70354 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Msx3P70354 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.18□□□□□ -0.14
Msx3P70354 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Msx3P70354 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Msx3P70354 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Msx3P70354 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Msx3P70354 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Msx3P70354 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Msx3P70354 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Msx3P70354 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Msx3P70354 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Msx3P70354 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Msx3P70354 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Msx3P70354 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Msx3P70354 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Msx3P70354 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Msx3P70354 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.17□□□□□ -0.14
Msx3P70354 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Msx3P70354 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms