Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm6P62313 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm6P62313 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Lsm6P62313 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Lsm6P62313 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.13□□□□□ -0.47
Lsm6P62313 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Lsm6P62313 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm6P62313 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm6P62313 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm6P62313 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm6P62313 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm6P62313 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm6P62313 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.13□□□□□ -0.47
Lsm6P62313 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm6P62313 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm6P62313 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm6P62313 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm6P62313 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm6P62313 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Lsm6P62313 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm6P62313 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm6P62313 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm6P62313 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm6P62313 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm6P62313 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.12□□□□□ -0.47
Lsm6P62313 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm6P62313 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.12□□□□□ -0.47
Lsm6P62313 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm6P62313 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.12□□□□□ -0.47
Lsm6P62313 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Lsm6P62313 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm6P62313 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm6P62313 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm6P62313 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Lsm6P62313 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm6P62313 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Lsm6P62313 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm6P62313 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.12□□□□□ -0.47
Lsm6P62313 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.12□□□□□ -0.47
Lsm6P62313 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.12□□□□□ -0.47
Lsm6P62313 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Lsm6P62313 Gm17837-201ENSMUST00000186435 985 ntBASIC12.12□□□□□ -0.47
Lsm6P62313 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm6P62313 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.12□□□□□ -0.47
Lsm6P62313 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm6P62313 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Lsm6P62313 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm6P62313 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.12□□□□□ -0.47
Lsm6P62313 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm6P62313 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.12□□□□□ -0.47
Lsm6P62313 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Lsm6P62313 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.12□□□□□ -0.47
Lsm6P62313 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm6P62313 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm6P62313 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Lsm6P62313 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm6P62313 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm6P62313 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Lsm6P62313 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.11□□□□□ -0.47
Lsm6P62313 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm6P62313 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm6P62313 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm6P62313 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm6P62313 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm6P62313 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm6P62313 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm6P62313 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm6P62313 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm6P62313 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm6P62313 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Lsm6P62313 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm6P62313 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Lsm6P62313 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Lsm6P62313 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm6P62313 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm6P62313 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Lsm6P62313 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.11□□□□□ -0.47
Lsm6P62313 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Lsm6P62313 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm6P62313 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm6P62313 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm6P62313 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm6P62313 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm6P62313 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm6P62313 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.11□□□□□ -0.47
Lsm6P62313 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.11□□□□□ -0.47
Lsm6P62313 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Lsm6P62313 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.11□□□□□ -0.47
Lsm6P62313 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Lsm6P62313 Gm8927-201ENSMUST00000181978 981 ntBASIC12.11□□□□□ -0.47
Lsm6P62313 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm6P62313 Gm43703-201ENSMUST00000200523 763 ntBASIC12.11□□□□□ -0.47
Lsm6P62313 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.11□□□□□ -0.47
Lsm6P62313 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm6P62313 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm6P62313 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm6P62313 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm6P62313 Gm3222-201ENSMUST00000071282 990 ntBASIC12.11□□□□□ -0.47
Lsm6P62313 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm6P62313 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms