Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Msh6P54276 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Msh6P54276 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Msh6P54276 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Msh6P54276 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC17.37■□□□□ 0.37
Msh6P54276 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Msh6P54276 Gm13730-201ENSMUST00000121036 1462 ntBASIC17.37■□□□□ 0.37
Msh6P54276 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Msh6P54276 Gm15236-201ENSMUST00000117309 379 ntBASIC17.37■□□□□ 0.37
Msh6P54276 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Msh6P54276 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Msh6P54276 Mir3102-201ENSMUST00000175555 104 ntBASIC17.37■□□□□ 0.37
Msh6P54276 Gm7584-201ENSMUST00000175829 940 ntBASIC17.37■□□□□ 0.37
Msh6P54276 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC17.37■□□□□ 0.37
Msh6P54276 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC17.37■□□□□ 0.37
Msh6P54276 Gm17870-201ENSMUST00000219489 1174 ntBASIC17.37■□□□□ 0.37
Msh6P54276 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Msh6P54276 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC17.37■□□□□ 0.37
Msh6P54276 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Msh6P54276 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Msh6P54276 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Msh6P54276 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Msh6P54276 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Msh6P54276 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Msh6P54276 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Msh6P54276 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Msh6P54276 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Msh6P54276 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Msh6P54276 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Msh6P54276 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
Msh6P54276 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC17.36■□□□□ 0.37
Msh6P54276 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Msh6P54276 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Msh6P54276 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Msh6P54276 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Msh6P54276 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Msh6P54276 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Msh6P54276 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Msh6P54276 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Msh6P54276 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
Msh6P54276 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Msh6P54276 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Msh6P54276 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Msh6P54276 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Msh6P54276 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Msh6P54276 Gm13350-201ENSMUST00000120519 479 ntBASIC17.36■□□□□ 0.37
Msh6P54276 Gm1335-201ENSMUST00000121653 386 ntBASIC17.36■□□□□ 0.37
Msh6P54276 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
Msh6P54276 Gm27501-201ENSMUST00000183599 107 ntBASIC17.36■□□□□ 0.37
Msh6P54276 Gm42550-201ENSMUST00000201553 960 ntBASIC17.36■□□□□ 0.37
Msh6P54276 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC17.36■□□□□ 0.37
Msh6P54276 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC17.36■□□□□ 0.37
Msh6P54276 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Msh6P54276 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Msh6P54276 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Msh6P54276 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Msh6P54276 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
Msh6P54276 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Msh6P54276 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Msh6P54276 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Msh6P54276 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Msh6P54276 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Msh6P54276 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Msh6P54276 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Msh6P54276 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Msh6P54276 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Msh6P54276 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Msh6P54276 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Msh6P54276 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Msh6P54276 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Msh6P54276 Gm15770-201ENSMUST00000117498 584 ntBASIC17.35■□□□□ 0.37
Msh6P54276 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Msh6P54276 Gm43822-201ENSMUST00000200285 476 ntBASIC17.35■□□□□ 0.37
Msh6P54276 Gm17330-201ENSMUST00000221047 165 ntBASIC17.35■□□□□ 0.37
Msh6P54276 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Msh6P54276 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Msh6P54276 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Msh6P54276 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Msh6P54276 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Msh6P54276 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Msh6P54276 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Msh6P54276 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC17.35■□□□□ 0.37
Msh6P54276 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Msh6P54276 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Msh6P54276 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Msh6P54276 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Msh6P54276 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Msh6P54276 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Msh6P54276 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Msh6P54276 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Msh6P54276 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Msh6P54276 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Msh6P54276 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Msh6P54276 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Msh6P54276 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Msh6P54276 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC17.34■□□□□ 0.37
Msh6P54276 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC17.34■□□□□ 0.37
Msh6P54276 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Msh6P54276 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC17.34■□□□□ 0.37
Msh6P54276 Gm27243-201ENSMUST00000183964 521 ntBASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms