Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cux1P53564 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC20.88■□□□□ 0.93
Cux1P53564 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cux1P53564 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Cux1P53564 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cux1P53564 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Cux1P53564 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cux1P53564 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cux1P53564 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cux1P53564 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cux1P53564 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cux1P53564 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cux1P53564 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Cux1P53564 Gm8805-201ENSMUST00000117848 313 ntBASIC20.87■□□□□ 0.93
Cux1P53564 Gm11964-201ENSMUST00000120982 444 ntBASIC20.87■□□□□ 0.93
Cux1P53564 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cux1P53564 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC20.87■□□□□ 0.93
Cux1P53564 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cux1P53564 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Cux1P53564 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cux1P53564 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cux1P53564 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cux1P53564 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cux1P53564 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cux1P53564 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cux1P53564 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cux1P53564 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cux1P53564 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cux1P53564 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC20.86■□□□□ 0.93
Cux1P53564 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC20.86■□□□□ 0.93
Cux1P53564 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cux1P53564 Mir877-201ENSMUST00000104738 85 ntBASIC20.86■□□□□ 0.93
Cux1P53564 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC20.86■□□□□ 0.93
Cux1P53564 Gm19163-201ENSMUST00000223313 780 ntBASIC20.86■□□□□ 0.93
Cux1P53564 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cux1P53564 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cux1P53564 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cux1P53564 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cux1P53564 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cux1P53564 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cux1P53564 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Cux1P53564 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Cux1P53564 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cux1P53564 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cux1P53564 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cux1P53564 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cux1P53564 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cux1P53564 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cux1P53564 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Cux1P53564 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cux1P53564 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC20.85■□□□□ 0.93
Cux1P53564 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cux1P53564 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cux1P53564 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC20.85■□□□□ 0.93
Cux1P53564 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cux1P53564 Gm42872-201ENSMUST00000200026 1967 ntBASIC20.85■□□□□ 0.93
Cux1P53564 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cux1P53564 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Cux1P53564 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cux1P53564 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC20.85■□□□□ 0.93
Cux1P53564 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cux1P53564 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cux1P53564 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cux1P53564 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cux1P53564 Gm37466-201ENSMUST00000195692 652 ntBASIC20.84■□□□□ 0.93
Cux1P53564 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC20.84■□□□□ 0.93
Cux1P53564 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cux1P53564 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cux1P53564 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cux1P53564 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cux1P53564 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cux1P53564 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cux1P53564 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cux1P53564 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Cux1P53564 Gm13316-201ENSMUST00000140537 691 ntBASIC20.83■□□□□ 0.93
Cux1P53564 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC20.83■□□□□ 0.93
Cux1P53564 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC20.83■□□□□ 0.93
Cux1P53564 Gm6082-201ENSMUST00000215204 454 ntBASIC20.83■□□□□ 0.93
Cux1P53564 Gm43205-201ENSMUST00000198622 1968 ntBASIC20.83■□□□□ 0.93
Cux1P53564 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Cux1P53564 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cux1P53564 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cux1P53564 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cux1P53564 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cux1P53564 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cux1P53564 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cux1P53564 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Cux1P53564 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cux1P53564 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Cux1P53564 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cux1P53564 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cux1P53564 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cux1P53564 Gm2606-201ENSMUST00000100754 1002 ntBASIC20.83■□□□□ 0.92
Cux1P53564 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Cux1P53564 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Cux1P53564 Gm2383-201ENSMUST00000181461 807 ntBASIC20.83■□□□□ 0.92
Cux1P53564 Gm7293-201ENSMUST00000216682 1007 ntBASIC20.83■□□□□ 0.92
Cux1P53564 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Cux1P53564 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cux1P53564 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC20.83■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms