Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Gm18905-201ENSMUST00000205454 928 ntBASIC13.07□□□□□ -0.32
RoraP51448 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RoraP51448 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
RoraP51448 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RoraP51448 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.07□□□□□ -0.32
RoraP51448 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RoraP51448 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
RoraP51448 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
RoraP51448 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RoraP51448 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
RoraP51448 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.07□□□□□ -0.32
RoraP51448 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
RoraP51448 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
RoraP51448 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
RoraP51448 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RoraP51448 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RoraP51448 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RoraP51448 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.07□□□□□ -0.32
RoraP51448 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RoraP51448 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RoraP51448 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RoraP51448 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RoraP51448 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RoraP51448 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RoraP51448 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RoraP51448 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RoraP51448 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
RoraP51448 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
RoraP51448 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.06□□□□□ -0.32
RoraP51448 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
RoraP51448 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RoraP51448 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.06□□□□□ -0.32
RoraP51448 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.06□□□□□ -0.32
RoraP51448 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RoraP51448 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.06□□□□□ -0.32
RoraP51448 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RoraP51448 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RoraP51448 Gm27701-201ENSMUST00000184498 110 ntBASIC13.06□□□□□ -0.32
RoraP51448 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
RoraP51448 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RoraP51448 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RoraP51448 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RoraP51448 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RoraP51448 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RoraP51448 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RoraP51448 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
RoraP51448 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RoraP51448 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.06□□□□□ -0.32
RoraP51448 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.06□□□□□ -0.32
RoraP51448 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
RoraP51448 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RoraP51448 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RoraP51448 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
RoraP51448 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
RoraP51448 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RoraP51448 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RoraP51448 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RoraP51448 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RoraP51448 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RoraP51448 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RoraP51448 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RoraP51448 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
RoraP51448 Gm13385-201ENSMUST00000121089 220 ntBASIC13.05□□□□□ -0.32
RoraP51448 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
RoraP51448 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RoraP51448 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
RoraP51448 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RoraP51448 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
RoraP51448 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.05□□□□□ -0.32
RoraP51448 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.05□□□□□ -0.32
RoraP51448 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.05□□□□□ -0.32
RoraP51448 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RoraP51448 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RoraP51448 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RoraP51448 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RoraP51448 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.05□□□□□ -0.32
RoraP51448 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RoraP51448 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RoraP51448 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
RoraP51448 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RoraP51448 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
RoraP51448 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RoraP51448 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RoraP51448 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
RoraP51448 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RoraP51448 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
RoraP51448 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
RoraP51448 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RoraP51448 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RoraP51448 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RoraP51448 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RoraP51448 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
RoraP51448 Gm15806-201ENSMUST00000120696 955 ntBASIC13.04□□□□□ -0.32
RoraP51448 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.04□□□□□ -0.32
RoraP51448 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RoraP51448 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RoraP51448 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
RoraP51448 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.04□□□□□ -0.32
RoraP51448 Gm8584-201ENSMUST00000171982 758 ntBASIC13.04□□□□□ -0.32
RoraP51448 Gm28911-201ENSMUST00000188837 117 ntBASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms