Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
RetP35546 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RetP35546 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RetP35546 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.96□□□□□ -0.34
RetP35546 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RetP35546 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RetP35546 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
RetP35546 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
RetP35546 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.96□□□□□ -0.34
RetP35546 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RetP35546 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.96□□□□□ -0.34
RetP35546 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RetP35546 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RetP35546 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RetP35546 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RetP35546 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RetP35546 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RetP35546 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
RetP35546 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RetP35546 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.95□□□□□ -0.34
RetP35546 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RetP35546 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RetP35546 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RetP35546 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.95□□□□□ -0.34
RetP35546 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.95□□□□□ -0.34
RetP35546 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
RetP35546 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RetP35546 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RetP35546 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.95□□□□□ -0.34
RetP35546 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RetP35546 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.95□□□□□ -0.34
RetP35546 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RetP35546 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RetP35546 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RetP35546 Gm16476-201ENSMUST00000221544 139 ntBASIC12.95□□□□□ -0.34
RetP35546 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RetP35546 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RetP35546 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
RetP35546 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RetP35546 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RetP35546 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RetP35546 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RetP35546 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
RetP35546 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
RetP35546 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RetP35546 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
RetP35546 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RetP35546 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RetP35546 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.94□□□□□ -0.34
RetP35546 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RetP35546 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
RetP35546 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RetP35546 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.94□□□□□ -0.34
RetP35546 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RetP35546 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
RetP35546 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
RetP35546 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RetP35546 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.94□□□□□ -0.34
RetP35546 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RetP35546 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.94□□□□□ -0.34
RetP35546 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.94□□□□□ -0.34
RetP35546 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RetP35546 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RetP35546 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RetP35546 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RetP35546 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RetP35546 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
RetP35546 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
RetP35546 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RetP35546 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RetP35546 Mir1938-201ENSMUST00000158746 100 ntBASIC12.94□□□□□ -0.34
RetP35546 Gm9522-201ENSMUST00000182394 926 ntBASIC12.94□□□□□ -0.34
RetP35546 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.94□□□□□ -0.34
RetP35546 Mir7085-201ENSMUST00000184353 66 ntBASIC12.94□□□□□ -0.34
RetP35546 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.94□□□□□ -0.34
RetP35546 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RetP35546 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
RetP35546 Dupd1-202ENSMUST00000224735 548 ntBASIC12.94□□□□□ -0.34
RetP35546 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
RetP35546 Gm9899-201ENSMUST00000065519 555 ntBASIC12.94□□□□□ -0.34
RetP35546 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
RetP35546 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RetP35546 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RetP35546 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RetP35546 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RetP35546 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
RetP35546 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RetP35546 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.94□□□□□ -0.34
RetP35546 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RetP35546 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RetP35546 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.94□□□□□ -0.34
RetP35546 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.94□□□□□ -0.34
RetP35546 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RetP35546 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
RetP35546 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.94□□□□□ -0.34
RetP35546 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RetP35546 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RetP35546 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
RetP35546 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RetP35546 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms