Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mmp13P33435 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mmp13P33435 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.15□□□□□ -0.14
Mmp13P33435 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mmp13P33435 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Mmp13P33435 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.15□□□□□ -0.14
Mmp13P33435 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mmp13P33435 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mmp13P33435 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mmp13P33435 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mmp13P33435 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Mmp13P33435 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Mmp13P33435 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mmp13P33435 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Mmp13P33435 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mmp13P33435 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Mmp13P33435 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.14□□□□□ -0.15
Mmp13P33435 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mmp13P33435 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Mmp13P33435 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Mmp13P33435 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Mmp13P33435 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mmp13P33435 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.14□□□□□ -0.15
Mmp13P33435 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mmp13P33435 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Mmp13P33435 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.14□□□□□ -0.15
Mmp13P33435 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.14□□□□□ -0.15
Mmp13P33435 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.14□□□□□ -0.15
Mmp13P33435 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mmp13P33435 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mmp13P33435 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Mmp13P33435 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mmp13P33435 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Mmp13P33435 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Mmp13P33435 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
Mmp13P33435 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Mmp13P33435 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Mmp13P33435 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Mmp13P33435 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mmp13P33435 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Mmp13P33435 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Mmp13P33435 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.13□□□□□ -0.15
Mmp13P33435 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Mmp13P33435 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.13□□□□□ -0.15
Mmp13P33435 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Mmp13P33435 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Mmp13P33435 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Mmp13P33435 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.13□□□□□ -0.15
Mmp13P33435 Gm15957-201ENSMUST00000118893 974 ntBASIC14.13□□□□□ -0.15
Mmp13P33435 Gm15693-201ENSMUST00000120470 637 ntBASIC14.13□□□□□ -0.15
Mmp13P33435 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Mmp13P33435 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Mmp13P33435 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mmp13P33435 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Mmp13P33435 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Mmp13P33435 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.13□□□□□ -0.15
Mmp13P33435 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Mmp13P33435 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mmp13P33435 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mmp13P33435 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Mmp13P33435 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.13□□□□□ -0.15
Mmp13P33435 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
Mmp13P33435 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mmp13P33435 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.13□□□□□ -0.15
Mmp13P33435 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mmp13P33435 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Mmp13P33435 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.12□□□□□ -0.15
Mmp13P33435 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Mmp13P33435 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mmp13P33435 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mmp13P33435 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Mmp13P33435 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Mmp13P33435 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Mmp13P33435 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.12□□□□□ -0.15
Mmp13P33435 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mmp13P33435 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mmp13P33435 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mmp13P33435 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Mmp13P33435 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mmp13P33435 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mmp13P33435 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.12□□□□□ -0.15
Mmp13P33435 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.12□□□□□ -0.15
Mmp13P33435 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Mmp13P33435 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mmp13P33435 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mmp13P33435 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Mmp13P33435 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mmp13P33435 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mmp13P33435 Auts2-212ENSMUST00000178555 309 ntBASIC14.12□□□□□ -0.15
Mmp13P33435 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.12□□□□□ -0.15
Mmp13P33435 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.12□□□□□ -0.15
Mmp13P33435 Gm44608-201ENSMUST00000206827 855 ntBASIC14.12□□□□□ -0.15
Mmp13P33435 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mmp13P33435 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mmp13P33435 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mmp13P33435 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mmp13P33435 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mmp13P33435 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Mmp13P33435 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Mmp13P33435 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms