Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Gm27680-201ENSMUST00000184192 160 ntBASIC12.77□□□□□ -0.37
Cd40lgP27548 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cd40lgP27548 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cd40lgP27548 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Cd40lgP27548 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cd40lgP27548 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cd40lgP27548 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Cd40lgP27548 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cd40lgP27548 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cd40lgP27548 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cd40lgP27548 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cd40lgP27548 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cd40lgP27548 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cd40lgP27548 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Cd40lgP27548 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cd40lgP27548 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Cd40lgP27548 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Cd40lgP27548 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cd40lgP27548 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cd40lgP27548 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cd40lgP27548 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cd40lgP27548 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cd40lgP27548 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cd40lgP27548 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Cd40lgP27548 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cd40lgP27548 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
Cd40lgP27548 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cd40lgP27548 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.76□□□□□ -0.37
Cd40lgP27548 Gm27306-201ENSMUST00000183970 107 ntBASIC12.76□□□□□ -0.37
Cd40lgP27548 Mir6977-201ENSMUST00000184960 64 ntBASIC12.76□□□□□ -0.37
Cd40lgP27548 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cd40lgP27548 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.76□□□□□ -0.37
Cd40lgP27548 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cd40lgP27548 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cd40lgP27548 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Cd40lgP27548 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cd40lgP27548 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cd40lgP27548 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cd40lgP27548 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Cd40lgP27548 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cd40lgP27548 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cd40lgP27548 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cd40lgP27548 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cd40lgP27548 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cd40lgP27548 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.76□□□□□ -0.37
Cd40lgP27548 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cd40lgP27548 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cd40lgP27548 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.75□□□□□ -0.37
Cd40lgP27548 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cd40lgP27548 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cd40lgP27548 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cd40lgP27548 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cd40lgP27548 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cd40lgP27548 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cd40lgP27548 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cd40lgP27548 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cd40lgP27548 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cd40lgP27548 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cd40lgP27548 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cd40lgP27548 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Cd40lgP27548 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cd40lgP27548 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cd40lgP27548 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.75□□□□□ -0.37
Cd40lgP27548 Gm33320-201ENSMUST00000192232 530 ntBASIC12.75□□□□□ -0.37
Cd40lgP27548 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Cd40lgP27548 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cd40lgP27548 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cd40lgP27548 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cd40lgP27548 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cd40lgP27548 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cd40lgP27548 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cd40lgP27548 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cd40lgP27548 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cd40lgP27548 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Cd40lgP27548 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Cd40lgP27548 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cd40lgP27548 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cd40lgP27548 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cd40lgP27548 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cd40lgP27548 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cd40lgP27548 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cd40lgP27548 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Cd40lgP27548 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.74□□□□□ -0.37
Cd40lgP27548 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cd40lgP27548 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.74□□□□□ -0.37
Cd40lgP27548 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.74□□□□□ -0.37
Cd40lgP27548 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Cd40lgP27548 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Cd40lgP27548 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cd40lgP27548 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cd40lgP27548 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cd40lgP27548 BC001981-202ENSMUST00000191393 1545 ntBASIC12.74□□□□□ -0.37
Cd40lgP27548 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.74□□□□□ -0.37
Cd40lgP27548 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.74□□□□□ -0.37
Cd40lgP27548 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cd40lgP27548 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cd40lgP27548 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cd40lgP27548 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cd40lgP27548 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cd40lgP27548 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms