Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cbx3P23198 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cbx3P23198 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.56□□□□□ -0.4
Cbx3P23198 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Cbx3P23198 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cbx3P23198 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cbx3P23198 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cbx3P23198 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cbx3P23198 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cbx3P23198 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Cbx3P23198 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.56□□□□□ -0.4
Cbx3P23198 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC12.56□□□□□ -0.4
Cbx3P23198 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cbx3P23198 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Cbx3P23198 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.56□□□□□ -0.4
Cbx3P23198 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.56□□□□□ -0.4
Cbx3P23198 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Cbx3P23198 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cbx3P23198 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cbx3P23198 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cbx3P23198 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cbx3P23198 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cbx3P23198 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cbx3P23198 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cbx3P23198 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cbx3P23198 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cbx3P23198 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC12.56□□□□□ -0.4
Cbx3P23198 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cbx3P23198 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cbx3P23198 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cbx3P23198 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cbx3P23198 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cbx3P23198 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cbx3P23198 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cbx3P23198 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cbx3P23198 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Cbx3P23198 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Cbx3P23198 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.55□□□□□ -0.4
Cbx3P23198 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cbx3P23198 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cbx3P23198 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cbx3P23198 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cbx3P23198 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cbx3P23198 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cbx3P23198 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cbx3P23198 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cbx3P23198 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cbx3P23198 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cbx3P23198 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cbx3P23198 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cbx3P23198 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Cbx3P23198 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Cbx3P23198 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cbx3P23198 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.55□□□□□ -0.4
Cbx3P23198 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.55□□□□□ -0.4
Cbx3P23198 Gm12895-201ENSMUST00000122214 226 ntBASIC12.55□□□□□ -0.4
Cbx3P23198 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.55□□□□□ -0.4
Cbx3P23198 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cbx3P23198 Gm17807-201ENSMUST00000186869 298 ntBASIC12.55□□□□□ -0.4
Cbx3P23198 Gm7506-201ENSMUST00000207758 815 ntBASIC12.55□□□□□ -0.4
Cbx3P23198 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.55□□□□□ -0.4
Cbx3P23198 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.55□□□□□ -0.4
Cbx3P23198 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cbx3P23198 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cbx3P23198 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cbx3P23198 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cbx3P23198 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cbx3P23198 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Cbx3P23198 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Cbx3P23198 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cbx3P23198 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cbx3P23198 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cbx3P23198 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cbx3P23198 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cbx3P23198 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cbx3P23198 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cbx3P23198 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cbx3P23198 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cbx3P23198 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cbx3P23198 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cbx3P23198 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cbx3P23198 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cbx3P23198 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.55□□□□□ -0.4
Cbx3P23198 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cbx3P23198 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cbx3P23198 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cbx3P23198 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Cbx3P23198 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cbx3P23198 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cbx3P23198 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cbx3P23198 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cbx3P23198 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cbx3P23198 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cbx3P23198 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cbx3P23198 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cbx3P23198 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cbx3P23198 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cbx3P23198 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cbx3P23198 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Cbx3P23198 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms