Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp6P0C0A3 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC15.05■□□□□ -0
Chmp6P0C0A3 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC15.05■□□□□ -0
Chmp6P0C0A3 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC15.05■□□□□ -0
Chmp6P0C0A3 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC15.05■□□□□ -0
Chmp6P0C0A3 Gm27321-201ENSMUST00000185021 205 ntBASIC15.05■□□□□ -0
Chmp6P0C0A3 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC15.05■□□□□ -0
Chmp6P0C0A3 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp6P0C0A3 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp6P0C0A3 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp6P0C0A3 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp6P0C0A3 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC15.05■□□□□ -0
Chmp6P0C0A3 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC15.05■□□□□ -0
Chmp6P0C0A3 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp6P0C0A3 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp6P0C0A3 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp6P0C0A3 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp6P0C0A3 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC15.05■□□□□ -0
Chmp6P0C0A3 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC15.05■□□□□ -0
Chmp6P0C0A3 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp6P0C0A3 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Chmp6P0C0A3 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Chmp6P0C0A3 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Chmp6P0C0A3 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp6P0C0A3 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp6P0C0A3 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Chmp6P0C0A3 Gm30238-201ENSMUST00000195528 2603 ntBASIC15.04■□□□□ -0
Chmp6P0C0A3 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp6P0C0A3 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp6P0C0A3 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp6P0C0A3 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chmp6P0C0A3 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
Chmp6P0C0A3 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Chmp6P0C0A3 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC15.04■□□□□ -0
Chmp6P0C0A3 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC15.04■□□□□ -0
Chmp6P0C0A3 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC15.04■□□□□ -0
Chmp6P0C0A3 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Chmp6P0C0A3 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC15.04■□□□□ -0
Chmp6P0C0A3 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Chmp6P0C0A3 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chmp6P0C0A3 Gm3436-201ENSMUST00000179930 840 ntBASIC15.04■□□□□ -0
Chmp6P0C0A3 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chmp6P0C0A3 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chmp6P0C0A3 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Chmp6P0C0A3 Gm43703-201ENSMUST00000200523 763 ntBASIC15.04■□□□□ -0
Chmp6P0C0A3 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp6P0C0A3 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC15.04■□□□□ -0
Chmp6P0C0A3 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC15.04■□□□□ -0
Chmp6P0C0A3 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp6P0C0A3 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Chmp6P0C0A3 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp6P0C0A3 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp6P0C0A3 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC15.04■□□□□ -0
Chmp6P0C0A3 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chmp6P0C0A3 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp6P0C0A3 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chmp6P0C0A3 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chmp6P0C0A3 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp6P0C0A3 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp6P0C0A3 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp6P0C0A3 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp6P0C0A3 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp6P0C0A3 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp6P0C0A3 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Chmp6P0C0A3 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC15.03■□□□□ -0
Chmp6P0C0A3 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC15.03■□□□□ -0
Chmp6P0C0A3 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp6P0C0A3 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chmp6P0C0A3 Gm15460-201ENSMUST00000118147 391 ntBASIC15.03■□□□□ -0
Chmp6P0C0A3 Gm4875-201ENSMUST00000118257 786 ntBASIC15.03■□□□□ -0
Chmp6P0C0A3 Gm15487-201ENSMUST00000122373 465 ntBASIC15.03■□□□□ -0
Chmp6P0C0A3 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chmp6P0C0A3 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC15.03■□□□□ -0
Chmp6P0C0A3 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp6P0C0A3 Mir7684-201ENSMUST00000183858 60 ntBASIC15.03■□□□□ -0
Chmp6P0C0A3 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC15.03■□□□□ -0
Chmp6P0C0A3 AC156016.3-201ENSMUST00000228623 344 ntBASIC15.03■□□□□ -0
Chmp6P0C0A3 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp6P0C0A3 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp6P0C0A3 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chmp6P0C0A3 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chmp6P0C0A3 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp6P0C0A3 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC15.03■□□□□ -0
Chmp6P0C0A3 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp6P0C0A3 AC121805.2-201ENSMUST00000218808 2538 ntBASIC15.03■□□□□ -0
Chmp6P0C0A3 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp6P0C0A3 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp6P0C0A3 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp6P0C0A3 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chmp6P0C0A3 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
Chmp6P0C0A3 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC15.03■□□□□ -0
Chmp6P0C0A3 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp6P0C0A3 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp6P0C0A3 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp6P0C0A3 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp6P0C0A3 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp6P0C0A3 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Chmp6P0C0A3 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Chmp6P0C0A3 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Chmp6P0C0A3 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms